RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 CDC14AQ9UNH5 594 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 ST14Q9Y5Y6 855 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 H0YC42 278 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 KRT3P12035 628 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 CD247P20963 164 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 TPD52P55327 224 aaPredicted RBP9.68□□□□□ -0.86
PTPRA-204ENST00000380393 CDK16Q00536 496 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 LAPTM5Q13571 262 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 TFDP1Q14186 410 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 HIC1Q14526 733 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 SF3B3Q15393 1217 aaKnown RBP9.68□□□□□ -0.86
PTPRA-204ENST00000380393 SLC18A3Q16572 532 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 DGKDQ16760 1214 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 SHEQ5VZ18 495 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 ANKRD40Q6AI12 368 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 GALNT18Q6P9A2 607 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 REXO1Q8N1G1 1221 aaKnown RBP9.68□□□□□ -0.86
PTPRA-204ENST00000380393 TCAIMQ8N3R3 496 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 FIG4Q92562 907 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 CCDC124Q96CT7 223 aaKnown RBP9.68□□□□□ -0.86
PTPRA-204ENST00000380393 C7orf26Q96N11 449 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 TM9SF2Q99805 663 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 CDH7Q9ULB5 785 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 SIK3Q9Y2K2 1263 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 NUAK1O60285 661 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 SERPING1P05155 500 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 FCER1AP12319 257 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 BTF3P20290 206 aaKnown RBP9.68□□□□□ -0.86
PTPRA-204ENST00000380393 SLC26A2P50443 739 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 EPHB1P54762 984 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 C19orf57Q0VDD7 668 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 UBE3CQ15386 1083 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 PDXDC2PQ6P474 469 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 CORO6Q6QEF8 472 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 RASSF5Q8WWW0 418 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 TTC25Q96NG3 672 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 STRBPQ96SI9 672 aaKnown RBP9.68□□□□□ -0.86
PTPRA-204ENST00000380393 LPIN3Q9BQK8 851 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 KANSL2Q9H9L4 492 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 EPB41L4AQ9HCS5 686 aaPredicted RBP9.68□□□□□ -0.86
PTPRA-204ENST00000380393 ERVK-5Q9HDB9 667 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 ARHGEF4Q9NR80 690 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 CROCCQ5TZA2 2017 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 ZMYM2Q9UBW7 1377 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 CDH16O75309 829 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 GH2P01242 217 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 CA4P22748 312 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 FGD3Q5JSP0 725 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 SHKBP1Q8TBC3 707 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 SDR42E1Q8WUS8 393 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 TMEM120AQ9BXJ8 343 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 ADNPQ9H2P0 1102 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 KLHL42Q9P2K6 505 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 PCDHGB3Q9Y5G1 929 aa9.68□□□□□ -0.86
PTPRA-204ENST00000380393 COL4A1P02462 1669 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 TNKSO95271 1327 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 TRIM77I1YAP6 450 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 NDUFS2O75306 463 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 CDH1P12830 882 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 NELFEP18615 380 aaKnown RBP9.67□□□□□ -0.86
PTPRA-204ENST00000380393 ALAS2P22557 587 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 PKLRP30613 574 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 NDST2P52849 883 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 TMPRSS15P98073 1019 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 OTUD4Q01804 1114 aaKnown RBP9.67□□□□□ -0.86
PTPRA-204ENST00000380393 RAPGEF1Q13905 1077 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 TRAF7Q6Q0C0 670 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 EEPD1Q7L9B9 569 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 TRIM63Q969Q1 353 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 SHISA4Q96DD7 197 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 SLC2A11Q9BYW1 496 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 NARFLQ9H6Q4 476 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 VPS4AQ9UN37 437 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 GNEQ9Y223 722 aaKnown RBP9.67□□□□□ -0.86
PTPRA-204ENST00000380393 TAF1P21675 1872 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 ZNF839A8K0R7 811 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 ASNA1O43681 348 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 PDE8AO60658 829 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 SEMA3DO95025 777 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 TBXAS1P24557 533 aaPredicted RBP9.67□□□□□ -0.86
PTPRA-204ENST00000380393 POLR2GP62487 172 aaKnown RBP eCLIP9.67□□□□□ -0.86
PTPRA-204ENST00000380393 MRPL28Q13084 256 aaKnown RBP9.67□□□□□ -0.86
PTPRA-204ENST00000380393 DNASE1L3Q13609 305 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 IFIT1BQ5T764 474 aaKnown RBP9.67□□□□□ -0.86
PTPRA-204ENST00000380393 OGFRL1Q5TC84 451 aaPredicted RBP9.67□□□□□ -0.86
PTPRA-204ENST00000380393 DSG4Q86SJ6 1040 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 ZSCAN29Q8IWY8 852 aaPredicted RBP9.67□□□□□ -0.86
PTPRA-204ENST00000380393 LRRC57Q8N9N7 239 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 NEDD1Q8NHV4 660 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 ZUFSPQ96AP4 578 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 ZSCAN5AQ9BUG6 496 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 TDRD1Q9BXT4 1180 aaKnown RBP9.67□□□□□ -0.86
PTPRA-204ENST00000380393 PLA2G4CQ9UP65 541 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 CYP2D7A0A087X1C5 515 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 POC1B-GALNT4F8VUJ3 575 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 MEN1O00255 615 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 MTSS1O43312 755 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 THAP12O43422 761 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 BMP15O95972 392 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 CSF1RP07333 972 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms