RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 USP39Q53GS9 565 aaKnown RBP14.49□□□□□ -0.09
PRPF18-202ENST00000378572 STPG1Q5TH74 334 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 RNF43Q68DV7 783 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 TCEAL6Q6IPX3 200 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 TRIM65Q6PJ69 517 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 SV2AQ7L0J3 742 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 LRRC8AQ8IWT6 810 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 NUP93Q8N1F7 819 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 EHBP1Q8NDI1 1231 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 PDZD8Q8NEN9 1154 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 LMO3Q8TAP4 145 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 TCEAL3Q969E4 200 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 CRACR2AQ9BSW2 395 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 LSM14BQ9BX40 385 aaKnown RBP14.49□□□□□ -0.09
PRPF18-202ENST00000378572 B3GNT5Q9BYG0 378 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 RNF38Q9H0F5 515 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 BCCIPQ9P287 314 aaKnown RBP eCLIP14.49□□□□□ -0.09
PRPF18-202ENST00000378572 LUC7L2Q9Y383 392 aaKnown RBP14.49□□□□□ -0.09
PRPF18-202ENST00000378572 NME7Q9Y5B8 376 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 KIAA1549LQ6ZVL6 1849 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 RTN3O95197 1032 aaPredicted RBP14.49□□□□□ -0.09
PRPF18-202ENST00000378572 C4BPAP04003 597 aaKnown RBP14.49□□□□□ -0.09
PRPF18-202ENST00000378572 APODP05090 189 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 IRF1P10914 325 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 SLC9A1P19634 815 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 CDH8P55286 799 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 ZBED6P86452 979 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 NCOA4Q13772 614 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 DHCR24Q15392 516 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 KLHDC7AQ5VTJ3 777 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 FAM35AQ86V20 835 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 FBXL13Q8NEE6 735 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 CCDC112Q8NEF3 446 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 USP33Q8TEY7 942 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 ZNF516Q92618 1163 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 ELMO3Q96BJ8 720 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 TNIP3Q96KP6 325 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 PANX2Q96RD6 677 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 EDEM2Q9BV94 578 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 DUSP15Q9H1R2 295 aaPredicted RBP14.49□□□□□ -0.09
PRPF18-202ENST00000378572 GANQ9H2C0 597 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 SIX2Q9NPC8 291 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 KRT82Q9NSB4 513 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 RXFP3Q9NSD7 469 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 FAM207AQ9NSI2 230 aaPredicted RBP14.49□□□□□ -0.09
PRPF18-202ENST00000378572 SH3BP1Q9Y3L3 701 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 EML5Q05BV3 1969 aa14.49□□□□□ -0.09
PRPF18-202ENST00000378572 ALDH1A2O94788 518 aa14.48□□□□□ -0.09
PRPF18-202ENST00000378572 OAS1P00973 400 aaKnown RBP14.48□□□□□ -0.09
PRPF18-202ENST00000378572 ADH5P11766 374 aa14.48□□□□□ -0.09
PRPF18-202ENST00000378572 P4HA1P13674 534 aa14.48□□□□□ -0.09
PRPF18-202ENST00000378572 TIE1P35590 1138 aa14.48□□□□□ -0.09
PRPF18-202ENST00000378572 ZXDBP98169 803 aa14.48□□□□□ -0.09
PRPF18-202ENST00000378572 ZNF397Q8NF99 534 aaPredicted RBP14.48□□□□□ -0.09
PRPF18-202ENST00000378572 ZC3H10Q96K80 434 aaKnown RBP14.48□□□□□ -0.09
PRPF18-202ENST00000378572 PNKPQ96T60 521 aa14.48□□□□□ -0.09
PRPF18-202ENST00000378572 INTS2Q9H0H0 1204 aaKnown RBP14.48□□□□□ -0.09
PRPF18-202ENST00000378572 NUCKS1Q9H1E3 243 aaKnown RBP14.48□□□□□ -0.09
PRPF18-202ENST00000378572 DMAP1Q9NPF5 467 aaPredicted RBP14.48□□□□□ -0.09
PRPF18-202ENST00000378572 ARHGEF4Q9NR80 690 aa14.48□□□□□ -0.09
PRPF18-202ENST00000378572 TMEM30AQ9NV96 361 aa14.48□□□□□ -0.09
PRPF18-202ENST00000378572 EBF1Q9UH73 591 aa14.48□□□□□ -0.09
PRPF18-202ENST00000378572 MYO6Q9UM54 1294 aa14.48□□□□□ -0.09
PRPF18-202ENST00000378572 EPHB6O15197 1021 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 NRDCO43847 1150 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 AP1G2O75843 785 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 KLF8O95600 359 aaPredicted RBP14.47□□□□□ -0.09
PRPF18-202ENST00000378572 STAU1O95793 577 aaKnown RBP14.47□□□□□ -0.09
PRPF18-202ENST00000378572 FECHP22830 423 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 KRT9P35527 623 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 SLC6A11P48066 632 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 LIMK1P53667 647 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 SLC5A3P53794 718 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 ORC1Q13415 861 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 HECTD3Q5T447 861 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 BTBD8Q5XKL5 378 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 CYP2U1Q7Z449 544 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 C11orf74Q86VG3 221 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 PGBD3Q8N328 593 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 ALLCQ8N6M5 410 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 OR8K1Q8NGG5 319 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 SMARCD1Q96GM5 515 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 DNAJC7Q99615 494 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 XYLT2Q9H1B5 865 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.47□□□□□ -0.096e-16■■■■■ 187.5
PRPF18-202ENST00000378572 RAB20Q9NX57 234 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 APEX2Q9UBZ4 518 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 MMP17Q9ULZ9 603 aa14.47□□□□□ -0.09
PRPF18-202ENST00000378572 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.46□□□□□ -0.09
PRPF18-202ENST00000378572 K7EQS6 105 aa14.46□□□□□ -0.09
PRPF18-202ENST00000378572 RNF225M0QZC1 329 aaPredicted RBP14.46□□□□□ -0.09
PRPF18-202ENST00000378572 KAT7O95251 611 aa14.46□□□□□ -0.09
PRPF18-202ENST00000378572 FAM163BP0C2L3 166 aa14.46□□□□□ -0.09
PRPF18-202ENST00000378572 UCHL3P15374 230 aa14.46□□□□□ -0.09
PRPF18-202ENST00000378572 HNRNPH3P31942 346 aaKnown RBP14.46□□□□□ -0.09
PRPF18-202ENST00000378572 PIK3CAP42336 1068 aa14.46□□□□□ -0.09
PRPF18-202ENST00000378572 DHPSP49366 369 aaPredicted RBP14.46□□□□□ -0.09
PRPF18-202ENST00000378572 ADKP55263 362 aaKnown RBP14.46□□□□□ -0.09
PRPF18-202ENST00000378572 SMYD5Q6GMV2 418 aa14.46□□□□□ -0.09
PRPF18-202ENST00000378572 ACOT1Q86TX2 421 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms