RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 PIWIL2Q8TC59 973 aaKnown RBP9.04□□□□□ -0.96
PCDH9-202ENST00000377865 KAT5Q92993 513 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 PCDHB18PQ96TA0 734 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 TMEM79Q9BSE2 394 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 IDI2Q9BXS1 227 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 DPPA5A6NC42 116 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 SIGLEC16A6NMB1 481 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 GRAP2O75791 330 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 ANXA9O76027 345 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 ZSCAN5DPP0CG00 497 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 CAP2P40123 477 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 DCAF4L1Q3SXM0 396 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 TCHHL1Q5QJ38 904 aaPredicted RBP9.04□□□□□ -0.96
PCDH9-202ENST00000377865 SCARA3Q6AZY7 606 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 CLEC4FQ8N1N0 589 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 MFSD14AQ96MC6 490 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 DMTF1Q9Y222 760 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 RUVBL2Q9Y230 463 aaKnown RBP9.04□□□□□ -0.96
PCDH9-202ENST00000377865 EFR3BQ9Y2G0 817 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 INPP5FQ9Y2H2 1132 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 ITGB3P05106 788 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 CYP2F1P24903 491 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 NOMO3P69849 1222 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 PTPN11Q06124 597 aaPredicted RBP9.04□□□□□ -0.96
PCDH9-202ENST00000377865 NFIAQ12857 509 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 SMAD1Q15797 465 aaKnown RBP9.04□□□□□ -0.96
PCDH9-202ENST00000377865 TRIM16LQ309B1 348 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 KRT27Q7Z3Y8 459 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 STRA8Q7Z7C7 330 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 ZC3H3Q8IXZ2 948 aaKnown RBP9.04□□□□□ -0.96
PCDH9-202ENST00000377865 SNRNP27Q8WVK2 155 aaKnown RBP9.04□□□□□ -0.96
PCDH9-202ENST00000377865 C7orf26Q96N11 449 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 SP110Q9HB58 689 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 ETNK2Q9NVF9 386 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 SNX13Q9Y5W8 968 aa9.04□□□□□ -0.96
PCDH9-202ENST00000377865 ETS1P14921 441 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 NR1H2P55055 460 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 ANGEL2Q5VTE6 544 aaKnown RBP9.03□□□□□ -0.96
PCDH9-202ENST00000377865 IYDQ6PHW0 289 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 BRSK2Q8IWQ3 736 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 WRNIP1Q96S55 665 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 SLCO1B3Q9NPD5 702 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 RIC8BQ9NVN3 520 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 ITGA11Q9UKX5 1188 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 TMCO1Q9UM00 188 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 PRPF19Q9UMS4 504 aaKnown RBP9.03□□□□□ -0.96
PCDH9-202ENST00000377865 SNX9Q9Y5X1 595 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 MYH6P13533 1939 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 TRIM13O60858 407 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 RPL22P35268 128 aaKnown RBP9.03□□□□□ -0.96
PCDH9-202ENST00000377865 ATXN3P54252 364 aaPredicted RBP9.03□□□□□ -0.96
PCDH9-202ENST00000377865 IMPG1Q17R60 797 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 SV2CQ496J9 727 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 ADGRD1Q6QNK2 874 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 TSHZ1Q6ZSZ6 1077 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 BBS12Q6ZW61 710 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 PATL1Q86TB9 770 aaKnown RBP9.03□□□□□ -0.96
PCDH9-202ENST00000377865 CHSY1Q86X52 802 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 RFWD2Q8NHY2 731 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 PYDC1Q8WXC3 89 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 RXFP2Q8WXD0 754 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 WDR18Q9BV38 432 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 DDX4Q9NQI0 724 aaKnown RBP9.03□□□□□ -0.96
PCDH9-202ENST00000377865 SCHIP1Q9P0W5 487 aaPredicted RBP9.03□□□□□ -0.96
PCDH9-202ENST00000377865 AAR2Q9Y312 384 aaKnown RBP9.03□□□□□ -0.96
PCDH9-202ENST00000377865 RGPD2P0DJD1 1756 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 SAC3D1A6NKF1 404 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 RARBP10826 455 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 TTKP33981 857 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 GABRB2P47870 512 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 GEMP55040 296 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 ZPBP2Q6X784 338 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 PLD3Q8IV08 490 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 SYTL5Q8TDW5 730 aaPredicted RBP9.03□□□□□ -0.96
PCDH9-202ENST00000377865 DACH2Q96NX9 599 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 LRRC4CQ9HCJ2 640 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 S100A14Q9HCY8 104 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 APPL1Q9UKG1 709 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 AP4E1Q9UPM8 1137 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 PCDHA2Q9Y5H9 948 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 DDTLA6NHG4 134 aaPredicted RBP9.03□□□□□ -0.96
PCDH9-202ENST00000377865 ASB14A6NK59 587 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 TM7SF2O76062 418 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 PROCP04070 461 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 TPBGLP0DKB5 382 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 GFAPP14136 432 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 PNPLA4P41247 253 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 IREB2P48200 963 aaKnown RBP9.03□□□□□ -0.96
PCDH9-202ENST00000377865 DRICH1Q6PGQ1 229 aaPredicted RBP9.03□□□□□ -0.96
PCDH9-202ENST00000377865 VSTM1Q6UX27 236 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 ZBTB49Q6ZSB9 765 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 SLC22A9Q8IVM8 553 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 SULF1Q8IWU6 871 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 SEPT12Q8IYM1 358 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 MAGED4Q96JG8 741 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 SLC4A9Q96Q91 983 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 BRD8Q9H0E9 1235 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 XPNPEP3Q9NQH7 507 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.03□□□□□ -0.96
PCDH9-202ENST00000377865 LAMA4Q16363 1823 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms