RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 NCOA4Q13772 614 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 UAP1Q16222 522 aaPredicted RBP12.99□□□□□ -0.33
VRK3-202ENST00000377011 INTS6LQ5JSJ4 861 aaKnown RBP12.99□□□□□ -0.33
VRK3-202ENST00000377011 ICE2Q659A1 982 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 HFE2Q6ZVN8 426 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 OTOP3Q7RTS5 596 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 TMC3Q7Z5M5 1100 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 PACS2Q86VP3 889 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 SH2D3CQ8N5H7 860 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 TOP6BLQ8N6T0 577 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 TMC2Q8TDI7 906 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 ASIC4Q96FT7 647 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 AGPAT1Q99943 283 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 AP1M1Q9BXS5 423 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 PLA2G2FQ9BZM2 168 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 EPS15L1Q9UBC2 864 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 RASAL2Q9UJF2 1139 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 ZNF318Q5VUA4 2279 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 XYLBO75191 536 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 HLA-DRAP01903 254 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 FGGP02679 453 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 PAEPP09466 180 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 HAPLN1P10915 354 aaPredicted RBP12.99□□□□□ -0.33
VRK3-202ENST00000377011 ZNF844Q08AG5 666 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 DDR2Q16832 855 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 KCTD16Q68DU8 428 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 MMS22LQ6ZRQ5 1243 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 METTL23Q86XA0 190 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 UBL4BQ8N7F7 174 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 SHKBP1Q8TBC3 707 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 EDAQ92838 391 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 TXLNGYQ9BZA5 131 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 GOLPH3Q9H4A6 298 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 DSEQ9UL01 958 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 NUMBLQ9Y6R0 609 aa12.99□□□□□ -0.33
VRK3-202ENST00000377011 GREB1Q4ZG55 1949 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 OBSL1O75147 1896 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 MUC6Q6W4X9 2439 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 KIAA0754O94854 1291 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 FAM107AO95990 144 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 POU2F2P09086 479 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 GZMAP12544 262 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 MYL4P12829 197 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 PTPN2P17706 415 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 WARSP23381 471 aaKnown RBP12.98□□□□□ -0.33
VRK3-202ENST00000377011 MYO1EQ12965 1108 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 TRPC3Q13507 836 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 HTR4Q13639 388 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 TRADDQ15628 312 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 MGAT5BQ3V5L5 792 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 FAM171BQ6P995 826 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 GAREM2Q75VX8 874 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 DNAJB7Q7Z6W7 309 aaPredicted RBP12.98□□□□□ -0.33
VRK3-202ENST00000377011 THEM5Q8N1Q8 247 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 MYLPFQ96A32 169 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 RSPRY1Q96DX4 576 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 TWNKQ96RR1 684 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 ACBD6Q9BR61 282 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 IL21Q9HBE4 155 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 AMACRQ9UHK6 382 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 CDH7Q9ULB5 785 aa12.98□□□□□ -0.33
VRK3-202ENST00000377011 MRPS23Q9Y3D9 190 aaKnown RBP12.98□□□□□ -0.33
VRK3-202ENST00000377011 WDR87Q6ZQQ6 2873 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 A0A1W2PRU2 124 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 ANHXE9PGG2 379 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 CLDN5O00501 218 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 TTI1O43156 1089 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 DAPK3O43293 454 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 NUDT17P0C025 328 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 FCARP24071 287 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 CHRNA3P32297 505 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 ASPAP45381 313 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 ATP1A2P50993 1020 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 DR1Q01658 176 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 TEAD2Q15562 447 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 ZNF699Q32M78 642 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 NAA35Q5VZE5 725 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 DUPD1Q68J44 220 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 PHLDB3Q6NSJ2 640 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 ELMSAN1Q6PJG2 1045 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 TRIM67Q6ZTA4 783 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 TMEM150AQ86TG1 271 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 HOOK3Q86VS8 718 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 SLC44A3Q8N4M1 653 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 ACSF2Q96CM8 615 aaPredicted RBP12.97□□□□□ -0.33
VRK3-202ENST00000377011 FMO2Q99518 471 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 KXD1Q9BQD3 176 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 SYT15Q9BQS2 421 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 ERP44Q9BS26 406 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 NEUROG2Q9H2A3 272 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 CNOT10Q9H9A5 744 aaKnown RBP12.97□□□□□ -0.33
VRK3-202ENST00000377011 OSGEPQ9NPF4 335 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 SLC12A6Q9UHW9 1150 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 USP34Q70CQ2 3546 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 DENND4CQ5VZ89 1909 aa12.97□□□□□ -0.33
VRK3-202ENST00000377011 PHF2O75151 1096 aa12.96□□□□□ -0.33
VRK3-202ENST00000377011 RTN2O75298 545 aa12.96□□□□□ -0.33
VRK3-202ENST00000377011 STAU1O95793 577 aaKnown RBP12.96□□□□□ -0.33
VRK3-202ENST00000377011 ASS1P00966 412 aaKnown RBP12.96□□□□□ -0.33
VRK3-202ENST00000377011 ALADP13716 330 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms