RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 BIRC5O15392 142 aa17.1■□□□□ 0.33
TRIM39-201ENST00000376656 HNRNPRO43390 633 aaKnown RBP17.1■□□□□ 0.33
TRIM39-201ENST00000376656 SIN3BO75182 1162 aa17.1■□□□□ 0.33
TRIM39-201ENST00000376656 KRT38O76015 456 aa17.1■□□□□ 0.33
TRIM39-201ENST00000376656 OSBPP22059 807 aa17.1■□□□□ 0.33
TRIM39-201ENST00000376656 TNFSF9P41273 254 aa17.1■□□□□ 0.33
TRIM39-201ENST00000376656 RPL10AP62906 217 aaKnown RBP17.1■□□□□ 0.33
TRIM39-201ENST00000376656 GHRHRQ02643 423 aa17.1■□□□□ 0.33
TRIM39-201ENST00000376656 ARHGEF16Q5VV41 709 aa17.1■□□□□ 0.33
TRIM39-201ENST00000376656 PIWIL2Q8TC59 973 aaKnown RBP17.1■□□□□ 0.33
TRIM39-201ENST00000376656 MTMR12Q9C0I1 747 aa17.1■□□□□ 0.33
TRIM39-201ENST00000376656 PCDHGC3Q9UN70 934 aa17.1■□□□□ 0.33
TRIM39-201ENST00000376656 COL2A1P02458 1487 aaPredicted RBP17.1■□□□□ 0.33
TRIM39-201ENST00000376656 GSRP00390 522 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 APOEP02649 317 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 ITGA2BP08514 1039 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 L1CAMP32004 1257 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 XIAPP98170 497 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 TEDDM1Q5T9Z0 273 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 UNC5AQ6ZN44 842 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 ATG14Q6ZNE5 492 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 MAVSQ7Z434 540 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 PEBP4Q96S96 227 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 USP29Q9HBJ7 922 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 CAPN8A6NHC0 703 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 H0YCG3 227 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 H3BNX3 289 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 K7ERI5 159 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 VILLO15195 856 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 ATP9BO43861 1147 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 MAP3K6O95382 1288 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 BTKQ06187 659 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 RAB6CQ53S08 254 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 DEFB107AQ8IZN7 70 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 ACTRT2Q8TDY3 377 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 RAB6CQ9H0N0 254 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 APOBEC2Q9Y235 224 aaKnown RBP17.09■□□□□ 0.33
TRIM39-201ENST00000376656 MAD1L1Q9Y6D9 718 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 TRDMT1O14717 391 aaKnown RBP17.09■□□□□ 0.33
TRIM39-201ENST00000376656 KCNN4O15554 427 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 ZMPSTE24O75844 475 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 KLHL2O95198 593 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 ATG7O95352 703 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 TRUB2O95900 331 aaKnown RBP17.09■□□□□ 0.33
TRIM39-201ENST00000376656 TGFB2P61812 414 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 EMC2Q15006 297 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 MAP3K21Q5TCX8 1036 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 RBM44Q6ZP01 1051 aaKnown RBP17.09■□□□□ 0.33
TRIM39-201ENST00000376656 ARCQ7LC44 396 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 TMC7Q7Z402 723 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 RDM1Q8NG50 284 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 JADE3Q92613 823 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 LENG1Q96BZ8 264 aaPredicted RBP17.09■□□□□ 0.33
TRIM39-201ENST00000376656 PRICKLE1Q96MT3 831 aaPredicted RBP17.09■□□□□ 0.33
TRIM39-201ENST00000376656 CPXM1Q96SM3 734 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 USP18Q9UMW8 372 aa17.09■□□□□ 0.33
TRIM39-201ENST00000376656 LOC100653049A0A140TA62 436 aa17.08■□□□□ 0.33
TRIM39-201ENST00000376656 SLC15A5A6NIM6 579 aa17.08■□□□□ 0.33
TRIM39-201ENST00000376656 KRT34O76011 436 aa17.08■□□□□ 0.33
TRIM39-201ENST00000376656 LDHAP00338 332 aaKnown RBP17.08■□□□□ 0.33
TRIM39-201ENST00000376656 APRTP07741 180 aa17.08■□□□□ 0.33
TRIM39-201ENST00000376656 CD19P15391 556 aa17.08■□□□□ 0.33
TRIM39-201ENST00000376656 ITGAXP20702 1163 aa17.08■□□□□ 0.33
TRIM39-201ENST00000376656 DEUP1Q05D60 604 aa17.08■□□□□ 0.33
TRIM39-201ENST00000376656 TLR1Q15399 786 aa17.08■□□□□ 0.33
TRIM39-201ENST00000376656 MBLAC2Q68D91 279 aa17.08■□□□□ 0.33
TRIM39-201ENST00000376656 SLFN12LQ6IEE8 588 aa17.08■□□□□ 0.33
TRIM39-201ENST00000376656 ICA1LQ8NDH6 482 aa17.08■□□□□ 0.33
TRIM39-201ENST00000376656 DGCR14Q96DF8 476 aaKnown RBP17.08■□□□□ 0.33
TRIM39-201ENST00000376656 NIF3L1Q9GZT8 377 aa17.08■□□□□ 0.33
TRIM39-201ENST00000376656 EPB41L1Q9H4G0 881 aa17.08■□□□□ 0.33
TRIM39-201ENST00000376656 ITGA11Q9UKX5 1188 aa17.08■□□□□ 0.33
TRIM39-201ENST00000376656 PCDHGB4Q9UN71 923 aa17.08■□□□□ 0.33
TRIM39-201ENST00000376656 INPP5FQ9Y2H2 1132 aa17.08■□□□□ 0.33
TRIM39-201ENST00000376656 PCDHGB5Q9Y5G0 923 aa17.08■□□□□ 0.33
TRIM39-201ENST00000376656 KCNA4P22459 653 aa17.08■□□□□ 0.32
TRIM39-201ENST00000376656 POLR2BP30876 1174 aaKnown RBP17.08■□□□□ 0.32
TRIM39-201ENST00000376656 SCNN1BP51168 640 aa17.08■□□□□ 0.32
TRIM39-201ENST00000376656 CDH6P55285 790 aa17.08■□□□□ 0.32
TRIM39-201ENST00000376656 SH3PXD2AQ5TCZ1 1133 aa17.08■□□□□ 0.32
TRIM39-201ENST00000376656 WDR78Q5VTH9 848 aa17.08■□□□□ 0.32
TRIM39-201ENST00000376656 MPP5Q8N3R9 675 aa17.08■□□□□ 0.32
TRIM39-201ENST00000376656 DEPTORQ8TB45 409 aa17.08■□□□□ 0.32
TRIM39-201ENST00000376656 FNIP1Q8TF40 1166 aa17.08■□□□□ 0.32
TRIM39-201ENST00000376656 RSAD1Q9HA92 442 aa17.08■□□□□ 0.32
TRIM39-201ENST00000376656 PNPOQ9NVS9 261 aa17.08■□□□□ 0.32
TRIM39-201ENST00000376656 TMOD2Q9NZR1 351 aa17.08■□□□□ 0.32
TRIM39-201ENST00000376656 ADGRA2Q96PE1 1338 aa17.08■□□□□ 0.32
TRIM39-201ENST00000376656 TTLL13PA6NNM8 815 aa17.08■□□□□ 0.32
TRIM39-201ENST00000376656 ERBB2P04626 1255 aa17.08■□□□□ 0.32
TRIM39-201ENST00000376656 FGF3P11487 239 aaPredicted RBP17.08■□□□□ 0.32
TRIM39-201ENST00000376656 SLC1A6P48664 564 aa17.08■□□□□ 0.32
TRIM39-201ENST00000376656 SH3BGRP55822 239 aaPredicted RBP17.08■□□□□ 0.32
TRIM39-201ENST00000376656 VWA5B1Q5TIE3 1220 aa17.08■□□□□ 0.32
TRIM39-201ENST00000376656 ZNF341Q9BYN7 854 aa17.08■□□□□ 0.32
TRIM39-201ENST00000376656 PAK5Q9P286 719 aa17.08■□□□□ 0.32
TRIM39-201ENST00000376656 hCG_2014768A0A024R1R8 64 aa17.07■□□□□ 0.32
TRIM39-201ENST00000376656 CASQ2O14958 399 aaPredicted RBP17.07■□□□□ 0.32
TRIM39-201ENST00000376656 AP1G1O43747 822 aa17.07■□□□□ 0.32
TRIM39-201ENST00000376656 TFAP2AP05549 437 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms