RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 UMODL1Q5DID0 1318 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 PKNOX1P55347 436 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 PEX6Q13608 980 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 ITGA9Q13797 1035 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 LBRQ14739 615 aaKnown RBP6.75□□□□□ -1.33
SMC1A-202ENST00000375340 RIPOR1Q6ZS17 1223 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 OTOAQ7RTW8 1153 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 ZNF572Q7Z3I7 529 aaPredicted RBP6.75□□□□□ -1.33
SMC1A-202ENST00000375340 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.75□□□□□ -1.33
SMC1A-202ENST00000375340 CLPTM1LQ96KA5 538 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 TNIP3Q96KP6 325 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 PRDM5Q9NQX1 630 aaPredicted RBP6.75□□□□□ -1.33
SMC1A-202ENST00000375340 PAPOLBQ9NRJ5 636 aaKnown RBP6.75□□□□□ -1.33
SMC1A-202ENST00000375340 CD274Q9NZQ7 290 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 SNUPNO95149 360 aaKnown RBP6.75□□□□□ -1.33
SMC1A-202ENST00000375340 ERBB2P04626 1255 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 AMPD1P23109 780 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 RBL1P28749 1068 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 MAPK10P53779 464 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 DPY19L2Q6NUT2 758 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 KCNV1Q6PIU1 500 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 HASPINQ8TF76 798 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 L3MBTL3Q96JM7 780 aaPredicted RBP6.75□□□□□ -1.33
SMC1A-202ENST00000375340 CEP19Q96LK0 163 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 RNPEPL1Q9HAU8 725 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 M0R2N6 131 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 NFICP08651 508 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 CREB1P16220 341 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 GCNT1Q02742 428 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 NBPF12Q5TAG4 269 aaPredicted RBP6.75□□□□□ -1.33
SMC1A-202ENST00000375340 ADGRF2Q8IZF7 708 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 TMEM161BQ8NDZ6 487 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 ILKAPQ9H0C8 392 aaPredicted RBP6.75□□□□□ -1.33
SMC1A-202ENST00000375340 ETNK2Q9NVF9 386 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 SCHIP1Q9P0W5 487 aaPredicted RBP6.75□□□□□ -1.33
SMC1A-202ENST00000375340 VANGL2Q9ULK5 521 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 A0A0B4J269 797 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 MCL1Q07820 350 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 ZNF235Q14590 738 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 DGKDQ16760 1214 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 ZC3H12AQ5D1E8 599 aaKnown RBP6.75□□□□□ -1.33
SMC1A-202ENST00000375340 SLFN11Q7Z7L1 901 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 BHLHE22Q8NFJ8 381 aaPredicted RBP6.75□□□□□ -1.33
SMC1A-202ENST00000375340 NMRK1Q9NWW6 199 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 TRPM3Q9HCF6 1732 aaPredicted RBP6.74□□□□□ -1.33
SMC1A-202ENST00000375340 VDRP11473 427 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 AKAP5P24588 427 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 HDAC4P56524 1084 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 ADIGQ0VDE8 80 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 ETS2P15036 469 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 PGAM1P18669 254 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 NCKAP1LP55160 1127 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 OCA2Q04671 838 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 SV2CQ496J9 727 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 DACT2Q5SW24 774 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 ECHDC2Q86YB7 292 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 SPATA6LQ8N4H0 392 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.74□□□□□ -1.33
SMC1A-202ENST00000375340 PDCD2LQ9BRP1 358 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 GRIP2Q9C0E4 1043 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 PPME1Q9Y570 386 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 SNX5Q9Y5X3 404 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 E5RJQ4 531 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 F8W8V4 182 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 CCNHP51946 323 aaPredicted RBP6.74□□□□□ -1.33
SMC1A-202ENST00000375340 CNTN2Q02246 1040 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 SEL1L3Q68CR1 1132 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 TTC33Q6PID6 262 aaPredicted RBP6.74□□□□□ -1.33
SMC1A-202ENST00000375340 SZRD1Q7Z422 152 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 EIF1ADQ8N9N8 165 aaKnown RBP6.74□□□□□ -1.33
SMC1A-202ENST00000375340 ZNF184Q99676 751 aaPredicted RBP6.74□□□□□ -1.33
SMC1A-202ENST00000375340 ASCC2Q9H1I8 757 aaPredicted RBP6.74□□□□□ -1.33
SMC1A-202ENST00000375340 SNTG2Q9NY99 539 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 PCDHA2Q9Y5H9 948 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 SIPA1L3O60292 1781 aaPredicted RBP6.74□□□□□ -1.33
SMC1A-202ENST00000375340 TYW5A2RUC4 315 aaKnown RBP6.74□□□□□ -1.33
SMC1A-202ENST00000375340 CPA3P15088 417 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 STIP1P31948 543 aaKnown RBP6.74□□□□□ -1.33
SMC1A-202ENST00000375340 TTC39CQ8N584 583 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 GCNAQ96QF7 691 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 CHST12Q9NRB3 414 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 hCG_1818297A0A087WSY0 165 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 SMAPO00193 183 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 H2AFYO75367 372 aaKnown RBP6.74□□□□□ -1.33
SMC1A-202ENST00000375340 CSE1LP55060 971 aaKnown RBP6.74□□□□□ -1.33
SMC1A-202ENST00000375340 BACE1P56817 501 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 GTF2BQ00403 316 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 TMCO5AQ8N6Q1 288 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 ZNF555Q8NEP9 628 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 OR6Y1Q8NGX8 325 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 OSBPL7Q9BZF2 842 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 GRHL1Q9NZI5 618 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 WRAP73Q9P2S5 460 aaPredicted RBP6.74□□□□□ -1.33
SMC1A-202ENST00000375340 GGA2Q9UJY4 613 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 A0A087WZ62 844 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 ASB14A6NK59 587 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 C19orf81C9J6K1 198 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 KDM1AO60341 852 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 USP12O75317 370 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 INPP1P49441 399 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms