RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 NENFQ9UMX5 172 aa11.89□□□□□ -0.51
HSPG2-202ENST00000374676 CCL26Q9Y258 94 aa11.89□□□□□ -0.51
HSPG2-202ENST00000374676 CPQQ9Y646 472 aa11.89□□□□□ -0.51
HSPG2-202ENST00000374676 NUMBLQ9Y6R0 609 aa11.89□□□□□ -0.51
HSPG2-202ENST00000374676 TMCO5BA8MYB1 307 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 GOLGA6L6A8MZA4 724 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 CAPN9O14815 690 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 NCAM1P13591 858 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 PSMC3P17980 439 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 COG7P83436 770 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 ZXDBP98169 803 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 FCHO2Q0JRZ9 810 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 EFEMP1Q12805 493 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 USP4Q13107 963 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 GSE1Q14687 1217 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 ZNF77Q15935 545 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 SLC18A3Q16572 532 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 C2CD6Q53TS8 623 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 FAM102AQ5T9C2 384 aaPredicted RBP11.88□□□□□ -0.51
HSPG2-202ENST00000374676 ALKBH5Q6P6C2 394 aaKnown RBP11.88□□□□□ -0.51
HSPG2-202ENST00000374676 VITQ6UXI7 678 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 RNF135Q8IUD6 432 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 DEFB106AQ8N104 65 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 SLC44A3Q8N4M1 653 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 SPC24Q8NBT2 197 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 BPIFB1Q8TDL5 484 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 EDEM1Q92611 657 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 TRIM11Q96F44 468 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 ZFRQ96KR1 1074 aaKnown RBP11.88□□□□□ -0.51
HSPG2-202ENST00000374676 CCDC42Q96M95 316 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 LRRC3BQ96PB8 259 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 UHRF1Q96T88 793 aaPredicted RBP11.88□□□□□ -0.51
HSPG2-202ENST00000374676 RPP25Q9BUL9 199 aaKnown RBP11.88□□□□□ -0.51
HSPG2-202ENST00000374676 PLA2G2FQ9BZM2 168 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 NACA2Q9H009 215 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 SMG9Q9H0W8 520 aaKnown RBP11.88□□□□□ -0.51
HSPG2-202ENST00000374676 NHEJ1Q9H9Q4 299 aaPredicted RBP11.88□□□□□ -0.51
HSPG2-202ENST00000374676 CD320Q9NPF0 282 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 GKN1Q9NS71 199 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 RRN3Q9NYV6 651 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 MARCH2Q9P0N8 246 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 TMEM59LQ9UK28 342 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 NAALADL1Q9UQQ1 740 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 KIF26AQ9ULI4 1882 aaPredicted RBP11.88□□□□□ -0.51
HSPG2-202ENST00000374676 TRIOO75962 3097 aa11.88□□□□□ -0.51
HSPG2-202ENST00000374676 MYOFQ9NZM1 2061 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 TCRBV5S1A1TA0A578 114 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 SIGLEC16A6NMB1 481 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 GOLGA8SH3BPF8 625 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 LEFTY2O00292 366 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 MDM4O15151 490 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 AKR1B10O60218 316 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 DAB1O75553 588 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 MYBL1P10243 752 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 NOS2P35228 1153 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 MATKP42679 507 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 KPNA1P52294 538 aaPredicted RBP11.87□□□□□ -0.51
HSPG2-202ENST00000374676 GSDMDP57764 484 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 NNTQ13423 1086 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 TDGQ13569 410 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 ARHGAP29Q52LW3 1261 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 CCDC122Q5T0U0 273 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 SYPL2Q5VXT5 272 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 PLEKHA7Q6IQ23 1121 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 TMTC1Q8IUR5 882 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 CCDC170Q8IYT3 715 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 C3orf20Q8ND61 904 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 DQX1Q8TE96 717 aaKnown RBP11.87□□□□□ -0.51
HSPG2-202ENST00000374676 SH3RF2Q8TEC5 729 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 RSAD2Q8WXG1 361 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 NECAB3Q96P71 396 aaPredicted RBP11.87□□□□□ -0.51
HSPG2-202ENST00000374676 KXD1Q9BQD3 176 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 DDX23Q9BUQ8 820 aaKnown RBP11.87□□□□□ -0.51
HSPG2-202ENST00000374676 SMOC2Q9H3U7 446 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 DEF6Q9H4E7 631 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 TMEM51Q9NW97 253 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 THG1LQ9NWX6 298 aaKnown RBP11.87□□□□□ -0.51
HSPG2-202ENST00000374676 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.87□□□□□ -0.51
HSPG2-202ENST00000374676 RASAL2Q9UJF2 1139 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 SORCS3Q9UPU3 1222 aa11.87□□□□□ -0.51
HSPG2-202ENST00000374676 HBS1LQ9Y450 684 aaKnown RBP11.87□□□□□ -0.51
HSPG2-202ENST00000374676 SLC12A8A0AV02 714 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 E2F8A0AVK6 867 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 FAM170AA1A519 330 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 ANKRD62A6NC57 917 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 CHADO15335 359 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 GRAP2O75791 330 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 IGLV3-25P01717 112 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 ASGR2P07307 311 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 KRT3P12035 628 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 RRM1P23921 792 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 GFPT1Q06210 699 aaPredicted RBP11.86□□□□□ -0.51
HSPG2-202ENST00000374676 EIF4EBP2Q13542 120 aaPredicted RBP11.86□□□□□ -0.51
HSPG2-202ENST00000374676 MTF1Q14872 753 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 TRIP4Q15650 581 aaPredicted RBP11.86□□□□□ -0.51
HSPG2-202ENST00000374676 DCAF6Q58WW2 860 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 PPP1R15BQ5SWA1 713 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 HTR3DQ70Z44 454 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 MIB1Q86YT6 1006 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 YAF2Q8IY57 180 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms