RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 ZNF852Q6ZMS4 543 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 BHLHA9Q7RTU4 235 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 TMC6Q7Z403 805 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 DDX42Q86XP3 938 aaKnown RBP eCLIP19.21■□□□□ 0.67
PBX3-205ENST00000373492 CLEC4CQ8WTT0 213 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 RNF139Q8WU17 664 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 CPA5Q8WXQ8 436 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 NDRG1Q92597 394 aaKnown RBP19.21■□□□□ 0.67
PBX3-205ENST00000373492 FAM149B1Q96BN6 582 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 MSANTD3Q96H12 275 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 MRFAP1L1Q96HT8 127 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 NELL2Q99435 816 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 OSBPL6Q9BZF3 934 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 HAUS4Q9H6D7 363 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 SIT1Q9Y3P8 196 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 CPQQ9Y646 472 aa19.21■□□□□ 0.67
PBX3-205ENST00000373492 COL4A2P08572 1712 aa19.2■□□□□ 0.66
PBX3-205ENST00000373492 PAPSS1O43252 624 aaPredicted RBP19.2■□□□□ 0.66
PBX3-205ENST00000373492 PI15O43692 258 aa19.2■□□□□ 0.66
PBX3-205ENST00000373492 GOLGA8FQ08AF8 430 aa19.2■□□□□ 0.66
PBX3-205ENST00000373492 GOLGA8DPQ0D2H9 430 aa19.2■□□□□ 0.66
PBX3-205ENST00000373492 TDRD12Q587J7 1177 aaKnown RBP19.2■□□□□ 0.66
PBX3-205ENST00000373492 PPP1R2P3Q6NXS1 205 aa19.2■□□□□ 0.66
PBX3-205ENST00000373492 CC2D1AQ6P1N0 951 aaPredicted RBP19.2■□□□□ 0.66
PBX3-205ENST00000373492 C1orf228Q6PIY5 440 aa19.2■□□□□ 0.66
PBX3-205ENST00000373492 TPRG1Q6ZUI0 275 aa19.2■□□□□ 0.66
PBX3-205ENST00000373492 TOGARAM2Q6ZUX3 1019 aa19.2■□□□□ 0.66
PBX3-205ENST00000373492 ZDHHC17Q8IUH5 632 aa19.2■□□□□ 0.66
PBX3-205ENST00000373492 KIAA1958Q8N8K9 716 aa19.2■□□□□ 0.66
PBX3-205ENST00000373492 TTC16Q8NEE8 873 aa19.2■□□□□ 0.66
PBX3-205ENST00000373492 C18orf8Q96DM3 657 aa19.2■□□□□ 0.66
PBX3-205ENST00000373492 C8orf33Q9H7E9 229 aaPredicted RBP19.2■□□□□ 0.66
PBX3-205ENST00000373492 RAPGEFL1Q9UHV5 662 aa19.2■□□□□ 0.66
PBX3-205ENST00000373492 DNMT3LQ9UJW3 386 aa19.2■□□□□ 0.66
PBX3-205ENST00000373492 MRPS17Q9Y2R5 130 aaKnown RBP19.2■□□□□ 0.66
PBX3-205ENST00000373492 ERBB2P04626 1255 aa19.19■□□□□ 0.66
PBX3-205ENST00000373492 SERPING1P05155 500 aa19.19■□□□□ 0.66
PBX3-205ENST00000373492 UNGP13051 313 aaPredicted RBP19.19■□□□□ 0.66
PBX3-205ENST00000373492 NSFP46459 744 aaKnown RBP19.19■□□□□ 0.66
PBX3-205ENST00000373492 GABRB2P47870 512 aa19.19■□□□□ 0.66
PBX3-205ENST00000373492 USP4Q13107 963 aa19.19■□□□□ 0.66
PBX3-205ENST00000373492 ZNF77Q15935 545 aa19.19■□□□□ 0.66
PBX3-205ENST00000373492 CLEC16AQ2KHT3 1053 aa19.19■□□□□ 0.66
PBX3-205ENST00000373492 EFHC1Q5JVL4 640 aa19.19■□□□□ 0.66
PBX3-205ENST00000373492 E4F1Q66K89 784 aaPredicted RBP19.19■□□□□ 0.66
PBX3-205ENST00000373492 VPS36Q86VN1 386 aa19.19■□□□□ 0.66
PBX3-205ENST00000373492 PJA1Q8NG27 643 aa19.19■□□□□ 0.66
PBX3-205ENST00000373492 OR8K1Q8NGG5 319 aa19.19■□□□□ 0.66
PBX3-205ENST00000373492 SH3RF2Q8TEC5 729 aa19.19■□□□□ 0.66
PBX3-205ENST00000373492 FAM83CQ9BQN1 747 aa19.19■□□□□ 0.66
PBX3-205ENST00000373492 ZNHIT6Q9NWK9 470 aaKnown RBP19.19■□□□□ 0.66
PBX3-205ENST00000373492 SMPD4Q9NXE4 827 aa19.19■□□□□ 0.66
PBX3-205ENST00000373492 TJP2Q9UDY2 1190 aa19.19■□□□□ 0.66
PBX3-205ENST00000373492 NUDT5Q9UKK9 219 aa19.19■□□□□ 0.66
PBX3-205ENST00000373492 STRIP2Q9ULQ0 834 aa19.19■□□□□ 0.66
PBX3-205ENST00000373492 PIAS3Q9Y6X2 628 aa19.19■□□□□ 0.66
PBX3-205ENST00000373492 KMT2EQ8IZD2 1858 aa19.18■□□□□ 0.66
PBX3-205ENST00000373492 LEFTY2O00292 366 aa19.18■□□□□ 0.66
PBX3-205ENST00000373492 CAPN9O14815 690 aa19.18■□□□□ 0.66
PBX3-205ENST00000373492 TBX18O95935 607 aa19.18■□□□□ 0.66
PBX3-205ENST00000373492 GLI1P08151 1106 aa19.18■□□□□ 0.66
PBX3-205ENST00000373492 SKILP12757 684 aa19.18■□□□□ 0.66
PBX3-205ENST00000373492 SLC6A3Q01959 620 aa19.18■□□□□ 0.66
PBX3-205ENST00000373492 CENPCQ03188 943 aa19.18■□□□□ 0.66
PBX3-205ENST00000373492 MTF1Q14872 753 aa19.18■□□□□ 0.66
PBX3-205ENST00000373492 PDGFRLQ15198 375 aa19.18■□□□□ 0.66
PBX3-205ENST00000373492 FAM183BPQ6ZVS7 135 aa19.18■□□□□ 0.66
PBX3-205ENST00000373492 CNGA4Q8IV77 575 aa19.18■□□□□ 0.66
PBX3-205ENST00000373492 EDEM1Q92611 657 aa19.18■□□□□ 0.66
PBX3-205ENST00000373492 ZFYVE19Q96K21 471 aa19.18■□□□□ 0.66
PBX3-205ENST00000373492 PCDHB18PQ96TA0 734 aa19.18■□□□□ 0.66
PBX3-205ENST00000373492 FOXQ1Q9C009 403 aa19.18■□□□□ 0.66
PBX3-205ENST00000373492 POPDC2Q9HBU9 364 aa19.18■□□□□ 0.66
PBX3-205ENST00000373492 LTB4R2Q9NPC1 389 aa19.18■□□□□ 0.66
PBX3-205ENST00000373492 GKN1Q9NS71 199 aa19.18■□□□□ 0.66
PBX3-205ENST00000373492 ASNSD1Q9NWL6 643 aa19.18■□□□□ 0.66
PBX3-205ENST00000373492 RASAL2Q9UJF2 1139 aa19.18■□□□□ 0.66
PBX3-205ENST00000373492 F5P12259 2224 aa19.17■□□□□ 0.66
PBX3-205ENST00000373492 SHISA7A6NL88 538 aa19.17■□□□□ 0.66
PBX3-205ENST00000373492 FAM170BA6NMN3 283 aa19.17■□□□□ 0.66
PBX3-205ENST00000373492 GALR2O43603 387 aaPredicted RBP19.17■□□□□ 0.66
PBX3-205ENST00000373492 MFAP3LO75121 409 aa19.17■□□□□ 0.66
PBX3-205ENST00000373492 NCAM1P13591 858 aa19.17■□□□□ 0.66
PBX3-205ENST00000373492 KPNA1P52294 538 aaPredicted RBP19.17■□□□□ 0.66
PBX3-205ENST00000373492 YWHAZP63104 245 aaKnown RBP19.17■□□□□ 0.66
PBX3-205ENST00000373492 EFEMP1Q12805 493 aa19.17■□□□□ 0.66
PBX3-205ENST00000373492 BEND5Q7L4P6 421 aa19.17■□□□□ 0.66
PBX3-205ENST00000373492 ZNF571Q7Z3V5 609 aaPredicted RBP19.17■□□□□ 0.66
PBX3-205ENST00000373492 MIB1Q86YT6 1006 aa19.17■□□□□ 0.66
PBX3-205ENST00000373492 DRC7Q8IY82 874 aa19.17■□□□□ 0.66
PBX3-205ENST00000373492 CCDC105Q8IYK2 499 aa19.17■□□□□ 0.66
PBX3-205ENST00000373492 SLC30A5Q8TAD4 765 aa19.17■□□□□ 0.66
PBX3-205ENST00000373492 RIN3Q8TB24 985 aa19.17■□□□□ 0.66
PBX3-205ENST00000373492 OSCP1Q8WVF1 389 aa19.17■□□□□ 0.66
PBX3-205ENST00000373492 FAM3CQ92520 227 aa19.17■□□□□ 0.66
PBX3-205ENST00000373492 GTSE1Q9NYZ3 720 aa19.17■□□□□ 0.66
PBX3-205ENST00000373492 MARCH2Q9P0N8 246 aa19.17■□□□□ 0.66
PBX3-205ENST00000373492 SH3BP1Q9Y3L3 701 aa19.17■□□□□ 0.66
PBX3-205ENST00000373492 MUC6Q6W4X9 2439 aa19.17■□□□□ 0.66
PBX3-205ENST00000373492 FAM170AA1A519 330 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms