RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 SMAD7O15105 426 aaKnown RBP6.66□□□□□ -1.34
CHD6-202ENST00000373222 STAM2O75886 525 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 DNAJC8O75937 253 aaPredicted RBP6.66□□□□□ -1.34
CHD6-202ENST00000373222 ATP6V1G2O95670 118 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 CYP2C8P10632 490 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 KRT4P19013 534 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 CA4P22748 312 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 PROZP22891 400 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 ADRA1DP25100 572 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 YY1P25490 414 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 MIPP30301 263 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 CDC25CP30307 473 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 ATXN1P54253 815 aaKnown RBP6.66□□□□□ -1.34
CHD6-202ENST00000373222 IRX3P78415 501 aaPredicted RBP6.66□□□□□ -1.34
CHD6-202ENST00000373222 ATP11AP98196 1134 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 ITIH4Q14624 930 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 BBS9Q3SYG4 887 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 ALKBH2Q6NS38 261 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 MPZL3Q6UWV2 235 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 ZPBP2Q6X784 338 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 SYDE1Q6ZW31 735 aaPredicted RBP6.66□□□□□ -1.34
CHD6-202ENST00000373222 CYP4V2Q6ZWL3 525 aaPredicted RBP6.66□□□□□ -1.34
CHD6-202ENST00000373222 ARMC9Q7Z3E5 817 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 ZNF598Q86UK7 904 aaKnown RBP6.66□□□□□ -1.34
CHD6-202ENST00000373222 RIOX2Q8IUF8 465 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 TCEAL8Q8IYN2 117 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 FAM169BQ8N8A8 192 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 VPS37AQ8NEZ2 397 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 MAIP1Q8WWC4 291 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 TRMT2BQ96GJ1 504 aaKnown RBP6.66□□□□□ -1.34
CHD6-202ENST00000373222 RBM41Q96IZ5 413 aaKnown RBP6.66□□□□□ -1.34
CHD6-202ENST00000373222 B3GNT5Q9BYG0 378 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 SYNCQ9H7C4 482 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 UBN1Q9NPG3 1134 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 SLC17A7Q9P2U7 560 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 RBPJLQ9UBG7 517 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 PLXNA1Q9UIW2 1896 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 MCM8Q9UJA3 840 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 CHMP2BQ9UQN3 213 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 HES2Q9Y543 173 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 IPPQ9Y573 584 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 NME7Q9Y5B8 376 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 IGKV6-21A0A0C4DH24 114 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 FAM47DPA6NHR8 397 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 EIF1AYO14602 144 aaKnown RBP6.65□□□□□ -1.34
CHD6-202ENST00000373222 MGRN1O60291 552 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 MICAL2O94851 1124 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 CALB1P05937 261 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 STAG3L1P0CL83 205 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 TXNP10599 105 aaKnown RBP6.65□□□□□ -1.34
CHD6-202ENST00000373222 KDELR1P24390 212 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 TARSP26639 723 aaKnown RBP6.65□□□□□ -1.34
CHD6-202ENST00000373222 POLR2BP30876 1174 aaKnown RBP6.65□□□□□ -1.34
CHD6-202ENST00000373222 HALP42357 657 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 BASP1P80723 227 aaKnown RBP6.65□□□□□ -1.34
CHD6-202ENST00000373222 PIN1Q13526 163 aaPredicted RBP6.65□□□□□ -1.34
CHD6-202ENST00000373222 NEDD9Q14511 834 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 SNCBQ16143 134 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 HIF1AQ16665 826 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 CA9Q16790 459 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 DDR2Q16832 855 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 GALNTL6Q49A17 601 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.65□□□□□ -1.34
CHD6-202ENST00000373222 ZC3H12AQ5D1E8 599 aaKnown RBP6.65□□□□□ -1.34
CHD6-202ENST00000373222 CELF3Q5SZQ8 465 aaKnown RBP6.65□□□□□ -1.34
CHD6-202ENST00000373222 FAM102AQ5T9C2 384 aaPredicted RBP6.65□□□□□ -1.34
CHD6-202ENST00000373222 IER5Q5VY09 327 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 FAM160B1Q5W0V3 765 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 DESI1Q6ICB0 168 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 C1orf228Q6PIY5 440 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 RNF180Q86T96 592 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 FBXO36Q8NEA4 188 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 DENND1AQ8TEH3 1009 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 CLEC4CQ8WTT0 213 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 PTPRN2Q92932 1015 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 UTP4Q969X6 686 aaKnown RBP6.65□□□□□ -1.34
CHD6-202ENST00000373222 STAMBPL1Q96FJ0 436 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 PRR11Q96HE9 360 aaPredicted RBP6.65□□□□□ -1.34
CHD6-202ENST00000373222 CFAP57Q96MR6 1250 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 PGLYRP2Q96PD5 576 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 PITPNM3Q9BZ71 974 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 STMN4Q9H169 189 aaPredicted RBP6.65□□□□□ -1.34
CHD6-202ENST00000373222 MYLK2Q9H1R3 596 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 CAAP1Q9H8G2 361 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 NOD2Q9HC29 1040 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 FAM49BQ9NUQ9 324 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 GJD2Q9UKL4 321 aa6.65□□□□□ -1.34
CHD6-202ENST00000373222 EIF4E1BA6NMX2 242 aaKnown RBP6.65□□□□□ -1.35
CHD6-202ENST00000373222 E5RJQ4 531 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 SMAPO00193 183 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 CBX6O95503 412 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 TOP3BO95985 862 aaKnown RBP6.65□□□□□ -1.35
CHD6-202ENST00000373222 F12P00748 615 aaPredicted RBP6.65□□□□□ -1.35
CHD6-202ENST00000373222 RPSAP08865 295 aaKnown RBP6.65□□□□□ -1.35
CHD6-202ENST00000373222 GHRP10912 638 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 INSRRP14616 1297 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 IGFBP4P22692 258 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 SLC19A1P41440 591 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 PPM1FP49593 454 aaPredicted RBP6.65□□□□□ -1.35
CHD6-202ENST00000373222 CAV1Q03135 178 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms