RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 MDM4O15151 490 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 ZBED1O96006 694 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 APRTP07741 180 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 ESRRAP11474 423 aaPredicted RBP13.22□□□□□ -0.29
CTPS1-202ENST00000372621 NEFHP12036 1026 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 PRKG1Q13976 671 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 TRIM42Q8IWZ5 723 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 C12orf29Q8N999 325 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 MICAL1Q8TDZ2 1067 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 FAM136AQ96C01 138 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 MTBPQ96DY7 904 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 TBCBQ99426 244 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 ZNF670Q9BS34 389 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 SNRNP25Q9BV90 132 aaKnown RBP13.22□□□□□ -0.29
CTPS1-202ENST00000372621 OSBPL1AQ9BXW6 950 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 IQCGQ9H095 443 aaKnown RBP13.22□□□□□ -0.29
CTPS1-202ENST00000372621 NMRK1Q9NWW6 199 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 ZFATQ9P243 1243 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 ARMCX1Q9P291 453 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 SNNO75324 88 aaPredicted RBP13.22□□□□□ -0.29
CTPS1-202ENST00000372621 CSDE1O75534 798 aaKnown RBP13.22□□□□□ -0.29
CTPS1-202ENST00000372621 PGK2P07205 417 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 RAP1GDS1P52306 607 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 RCN1Q15293 331 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 LGSNQ5TDP6 509 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 PMF1Q6P1K2 205 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 DPH6Q7L8W6 267 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 ARMC2Q8NEN0 867 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 CCDC110Q8TBZ0 833 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 FAM172AQ8WUF8 416 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 CNKSR2Q8WXI2 1034 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 COPS5Q92905 334 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 E2F7Q96AV8 911 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 RNPEPQ9H4A4 650 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 ITGA11Q9UKX5 1188 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 SCN1AP35498 2009 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 KRT36O76013 467 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 PSMG1O95456 288 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 METTL18O95568 372 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 LINGO3P0C6S8 592 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 VHLP40337 213 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 TREML1Q86YW5 311 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 LINC01465Q8N7H1 131 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 RAB3IL1Q8TBN0 382 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 NT5C1AQ9BXI3 368 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 SLC4A5Q9BY07 1137 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 CYB561D2O14569 222 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 GCATO75600 419 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 GABBR2O75899 941 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 MAP3K6O95382 1288 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 CRHR1P34998 444 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 PHKA2P46019 1235 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 HDAC4P56524 1084 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 BMPR2Q13873 1038 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 TMEM132DQ14C87 1099 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 ATG16L1Q676U5 607 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 TRMT10BQ6PF06 316 aaKnown RBP13.21□□□□□ -0.29
CTPS1-202ENST00000372621 C4orf22Q6V702 233 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 TMEM110Q86TL2 294 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 VPS52Q8N1B4 723 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 LRRN4Q8WUT4 740 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 AFG1LQ8WV93 481 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 MCUR1Q96AQ8 359 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 CPB2Q96IY4 423 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 EBNA1BP2Q99848 306 aaKnown RBP13.21□□□□□ -0.29
CTPS1-202ENST00000372621 TRIM56Q9BRZ2 755 aaKnown RBP13.21□□□□□ -0.29
CTPS1-202ENST00000372621 C20orf27Q9GZN8 174 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 STX18Q9P2W9 335 aaKnown RBP13.21□□□□□ -0.29
CTPS1-202ENST00000372621 DNAJC25-GNG10A0A024R161 153 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 I3L4J1 428 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 NVLO15381 856 aaKnown RBP13.21□□□□□ -0.29
CTPS1-202ENST00000372621 MAGEC1O60732 1142 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 TBX10O75333 385 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 TPSB2P20231 275 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 RGS7P49802 495 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 SLC6A3Q01959 620 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 TPSAB1Q15661 275 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 TSNAXIP1Q2TAA8 658 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 GOLGA7BQ2TAP0 167 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 PPP1R26Q5T8A7 1209 aaPredicted RBP13.21□□□□□ -0.29
CTPS1-202ENST00000372621 SNX30Q5VWJ9 437 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 SCYL2Q6P3W7 929 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 TTC30AQ86WT1 665 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 FBXO16Q8IX29 292 aaPredicted RBP13.21□□□□□ -0.29
CTPS1-202ENST00000372621 MPP5Q8N3R9 675 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 GSDMBQ8TAX9 411 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 SLC13A1Q9BZW2 595 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 NRDE2Q9H7Z3 1164 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 ZNF395Q9H8N7 513 aaPredicted RBP13.21□□□□□ -0.29
CTPS1-202ENST00000372621 NGRNQ9NPE2 291 aaKnown RBP13.21□□□□□ -0.29
CTPS1-202ENST00000372621 C2CD2Q9Y426 696 aa13.21□□□□□ -0.29
CTPS1-202ENST00000372621 A0A087WZ62 844 aa13.2□□□□□ -0.3
CTPS1-202ENST00000372621 A8MXQ7 604 aa13.2□□□□□ -0.3
CTPS1-202ENST00000372621 KRT38O76015 456 aa13.2□□□□□ -0.3
CTPS1-202ENST00000372621 NEBLO76041 1014 aa13.2□□□□□ -0.3
CTPS1-202ENST00000372621 ARF4P18085 180 aaPredicted RBP13.2□□□□□ -0.3
CTPS1-202ENST00000372621 TMPRSS15P98073 1019 aa13.2□□□□□ -0.3
CTPS1-202ENST00000372621 SLC34A1Q06495 639 aa13.2□□□□□ -0.3
CTPS1-202ENST00000372621 SLC10A2Q12908 348 aaPredicted RBP13.2□□□□□ -0.3
CTPS1-202ENST00000372621 CHI3L2Q15782 390 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms