RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 ADCK5Q3MIX3 580 aa8.4□□□□□ -1.06
YIPF3-201ENST00000372417 CFAP221Q4G0U5 840 aa8.4□□□□□ -1.06
YIPF3-201ENST00000372417 INTS6LQ5JSJ4 861 aaKnown RBP8.4□□□□□ -1.06
YIPF3-201ENST00000372417 SFMBT2Q5VUG0 894 aa8.4□□□□□ -1.06
YIPF3-201ENST00000372417 JADE1Q6IE81 842 aa8.4□□□□□ -1.06
YIPF3-201ENST00000372417 DENND5BQ6ZUT9 1274 aa8.4□□□□□ -1.06
YIPF3-201ENST00000372417 PTRH1Q86Y79 214 aaKnown RBP8.4□□□□□ -1.06
YIPF3-201ENST00000372417 TICAM1Q8IUC6 712 aa8.4□□□□□ -1.06
YIPF3-201ENST00000372417 BBS7Q8IWZ6 715 aa8.4□□□□□ -1.06
YIPF3-201ENST00000372417 SPATA20Q8TB22 786 aa8.4□□□□□ -1.06
YIPF3-201ENST00000372417 ZNF564Q8TBZ8 553 aaPredicted RBP8.4□□□□□ -1.06
YIPF3-201ENST00000372417 HPS3Q969F9 1004 aa8.4□□□□□ -1.06
YIPF3-201ENST00000372417 FAM212AQ96EL1 285 aa8.4□□□□□ -1.06
YIPF3-201ENST00000372417 FUBP3Q96I24 572 aaKnown RBP eCLIP8.4□□□□□ -1.06
YIPF3-201ENST00000372417 SPATA17Q96L03 361 aa8.4□□□□□ -1.06
YIPF3-201ENST00000372417 SLC6A18Q96N87 628 aa8.4□□□□□ -1.06
YIPF3-201ENST00000372417 SLC46A1Q96NT5 459 aa8.4□□□□□ -1.06
YIPF3-201ENST00000372417 ACBD6Q9BR61 282 aa8.4□□□□□ -1.06
YIPF3-201ENST00000372417 NCOA5Q9HCD5 579 aaKnown RBP8.4□□□□□ -1.06
YIPF3-201ENST00000372417 ANO2Q9NQ90 1003 aa8.4□□□□□ -1.06
YIPF3-201ENST00000372417 GDF3Q9NR23 364 aa8.4□□□□□ -1.06
YIPF3-201ENST00000372417 TMPRSS4Q9NRS4 437 aa8.4□□□□□ -1.06
YIPF3-201ENST00000372417 EHD2Q9NZN4 543 aa8.4□□□□□ -1.06
YIPF3-201ENST00000372417 ATXN7L1Q9ULK2 861 aaPredicted RBP8.4□□□□□ -1.06
YIPF3-201ENST00000372417 RBM19Q9Y4C8 960 aaKnown RBP8.4□□□□□ -1.06
YIPF3-201ENST00000372417 SVILO95425 2214 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 ESPL1Q14674 2120 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 PTPRJQ12913 1337 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 CYP26A1O43174 497 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 EFSO43281 561 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 HMGB1P09429 215 aaKnown RBP8.39□□□□□ -1.07
YIPF3-201ENST00000372417 ACAT1P24752 427 aaKnown RBP8.39□□□□□ -1.07
YIPF3-201ENST00000372417 ANXA13P27216 316 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 CASRP41180 1078 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 MAGEA11P43364 429 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 CDH8P55286 799 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 USP46P62068 366 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 CCT2P78371 535 aaKnown RBP8.39□□□□□ -1.07
YIPF3-201ENST00000372417 BNIP3Q12983 259 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 KRT32Q14532 448 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 KYAT1Q16773 422 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 SV2CQ496J9 727 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 ZPBP2Q6X784 338 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 KANSL1Q7Z3B3 1105 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 CD302Q8IX05 232 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 OXR1Q8N573 874 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 CEP295NLQ96MC4 621 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 AIFM3Q96NN9 605 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 PKMYT1Q99640 499 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 DUSP9Q99956 384 aaKnown RBP8.39□□□□□ -1.07
YIPF3-201ENST00000372417 ORAI3Q9BRQ5 295 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 TTLL2Q9BWV7 592 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 BBS2Q9BXC9 721 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 TRIM9Q9C026 710 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 HAPLN2Q9GZV7 340 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 BTBD1Q9H0C5 482 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 LHX5Q9H2C1 402 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 GEMIN8Q9NWZ8 242 aaKnown RBP8.39□□□□□ -1.07
YIPF3-201ENST00000372417 DDX43Q9NXZ2 648 aaKnown RBP8.39□□□□□ -1.07
YIPF3-201ENST00000372417 THAP10Q9P2Z0 257 aaPredicted RBP8.39□□□□□ -1.07
YIPF3-201ENST00000372417 TJP2Q9UDY2 1190 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 GTF3C4Q9UKN8 822 aa8.39□□□□□ -1.07
YIPF3-201ENST00000372417 DNHD1Q96M86 4753 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 CDRT15L2A8MXV6 281 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 KPNA7A9QM74 516 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 SLC16A4O15374 487 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 OPA1O60313 960 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 NEMFO60524 1076 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 WNT1P04628 370 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 DUSP3P51452 185 aaPredicted RBP8.38□□□□□ -1.07
YIPF3-201ENST00000372417 ENPP2Q13822 863 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 TBR1Q16650 682 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 CCDC142Q17RM4 750 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 ZNF787Q6DD87 383 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 C4orf50Q6ZRC1 276 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 ERMNQ8TAM6 284 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 UCMAQ8WVF2 138 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 ZNF560Q96MR9 790 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 BHMT2Q9H2M3 363 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 MARK1Q9P0L2 795 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 WDR35Q9P2L0 1181 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 LRWD1Q9UFC0 647 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 DERAQ9Y315 318 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 PCDHGA8Q9Y5G5 932 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 HIVEP3Q5T1R4 2406 aa8.38□□□□□ -1.07
YIPF3-201ENST00000372417 APCP25054 2843 aa8.37□□□□□ -1.07
YIPF3-201ENST00000372417 A0A1W2PPC4 97 aa8.37□□□□□ -1.07
YIPF3-201ENST00000372417 SIGLEC6O43699 453 aa8.37□□□□□ -1.07
YIPF3-201ENST00000372417 HIP1RO75146 1068 aa8.37□□□□□ -1.07
YIPF3-201ENST00000372417 AGFG2O95081 481 aa8.37□□□□□ -1.07
YIPF3-201ENST00000372417 IGHV4-34P06331 123 aa8.37□□□□□ -1.07
YIPF3-201ENST00000372417 EPHX1P07099 455 aa8.37□□□□□ -1.07
YIPF3-201ENST00000372417 ADRB2P07550 413 aa8.37□□□□□ -1.07
YIPF3-201ENST00000372417 CISD3P0C7P0 127 aa8.37□□□□□ -1.07
YIPF3-201ENST00000372417 IRF1P10914 325 aa8.37□□□□□ -1.07
YIPF3-201ENST00000372417 CPA1P15085 419 aa8.37□□□□□ -1.07
YIPF3-201ENST00000372417 RPA1P27694 616 aa8.37□□□□□ -1.07
YIPF3-201ENST00000372417 CD38P28907 300 aa8.37□□□□□ -1.07
YIPF3-201ENST00000372417 RXRGP48443 463 aa8.37□□□□□ -1.07
YIPF3-201ENST00000372417 E2F5Q15329 346 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms