RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 MAGEA9P43362 315 aa19.24■□□□□ 0.67
VEGFA-206ENST00000372077 CREMQ03060 361 aa19.24■□□□□ 0.67
VEGFA-206ENST00000372077 DUSP4Q13115 394 aa19.24■□□□□ 0.67
VEGFA-206ENST00000372077 DDR2Q16832 855 aa19.24■□□□□ 0.67
VEGFA-206ENST00000372077 C17orf80Q9BSJ5 609 aa19.24■□□□□ 0.67
VEGFA-206ENST00000372077 SLC27A5Q9Y2P5 690 aa19.24■□□□□ 0.67
VEGFA-206ENST00000372077 RB1P06400 928 aa19.24■□□□□ 0.67
VEGFA-206ENST00000372077 PDGFRAP16234 1089 aa19.24■□□□□ 0.67
VEGFA-206ENST00000372077 NR1D1P20393 614 aa19.24■□□□□ 0.67
VEGFA-206ENST00000372077 GPR15P49685 360 aa19.24■□□□□ 0.67
VEGFA-206ENST00000372077 SLC5A3P53794 718 aa19.24■□□□□ 0.67
VEGFA-206ENST00000372077 UAP1Q16222 522 aaPredicted RBP19.24■□□□□ 0.67
VEGFA-206ENST00000372077 IQCKQ8N0W5 287 aa19.24■□□□□ 0.67
VEGFA-206ENST00000372077 CNPY3Q9BT09 278 aa19.24■□□□□ 0.67
VEGFA-206ENST00000372077 UBE2OQ9C0C9 1292 aaKnown RBP19.24■□□□□ 0.67
VEGFA-206ENST00000372077 IL37Q9NZH6 218 aa19.24■□□□□ 0.67
VEGFA-206ENST00000372077 PCDHA3Q9Y5H8 950 aa19.24■□□□□ 0.67
VEGFA-206ENST00000372077 GOLGA8KD6RF30 607 aa19.23■□□□□ 0.67
VEGFA-206ENST00000372077 USP17L7P0C7H9 530 aa19.23■□□□□ 0.67
VEGFA-206ENST00000372077 DNAJB2P25686 324 aa19.23■□□□□ 0.67
VEGFA-206ENST00000372077 PEX5P50542 639 aa19.23■□□□□ 0.67
VEGFA-206ENST00000372077 SPPL3Q8TCT6 385 aa19.23■□□□□ 0.67
VEGFA-206ENST00000372077 SPATA17Q96L03 361 aa19.23■□□□□ 0.67
VEGFA-206ENST00000372077 DDX23Q9BUQ8 820 aaKnown RBP19.23■□□□□ 0.67
VEGFA-206ENST00000372077 CES2O00748 559 aa19.23■□□□□ 0.67
VEGFA-206ENST00000372077 CORO7P57737 925 aa19.23■□□□□ 0.67
VEGFA-206ENST00000372077 YWHAZP63104 245 aaKnown RBP19.23■□□□□ 0.67
VEGFA-206ENST00000372077 UBE3AQ05086 875 aa19.23■□□□□ 0.67
VEGFA-206ENST00000372077 CCDC14Q49A88 953 aa19.23■□□□□ 0.67
VEGFA-206ENST00000372077 NUP93Q8N1F7 819 aa19.23■□□□□ 0.67
VEGFA-206ENST00000372077 ARFGAP1Q8N6T3 406 aa19.23■□□□□ 0.67
VEGFA-206ENST00000372077 SCAMP5Q8TAC9 235 aa19.23■□□□□ 0.67
VEGFA-206ENST00000372077 C11orf84Q9BUA3 381 aaPredicted RBP19.23■□□□□ 0.67
VEGFA-206ENST00000372077 DNAJC17Q9NVM6 304 aaKnown RBP19.23■□□□□ 0.67
VEGFA-206ENST00000372077 DAB1O75553 588 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 ATF2P15336 505 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 SLCO1A2P46721 670 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 MGAT5BQ3V5L5 792 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 KRT35Q92764 455 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 CEP295NLQ96MC4 621 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 SAMD11Q96NU1 681 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 SLC2A13Q96QE2 648 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 SH3GL2Q99962 352 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 NOVA2Q9UNW9 492 aaKnown RBP19.22■□□□□ 0.67
VEGFA-206ENST00000372077 IRAK3Q9Y616 596 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 GBF1Q92538 1859 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 COL4A4P53420 1690 aaPredicted RBP19.22■□□□□ 0.67
VEGFA-206ENST00000372077 YJEFN3A6XGL0 299 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 FOXO6A8MYZ6 492 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 E7ENQ6 273 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 CA3P07451 260 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 PTPN9P43378 593 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 TUFMP49411 452 aaKnown RBP19.22■□□□□ 0.67
VEGFA-206ENST00000372077 TAS2R40P59535 323 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 RPL10AP62906 217 aaKnown RBP19.22■□□□□ 0.67
VEGFA-206ENST00000372077 SDHAF4Q5VUM1 108 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 DAB2IPQ5VWQ8 1189 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 HFE2Q6ZVN8 426 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 SPRED2Q7Z698 418 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 UBL4BQ8N7F7 174 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 PBKQ96KB5 322 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 ALG13Q9NP73 1137 aaKnown RBP19.22■□□□□ 0.67
VEGFA-206ENST00000372077 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.22■□□□□ 0.674e-6■□□□□ 10.5
VEGFA-206ENST00000372077 MAFFQ9ULX9 164 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 USTQ9Y2C2 406 aa19.22■□□□□ 0.67
VEGFA-206ENST00000372077 PGRMC1O00264 195 aaKnown RBP19.21■□□□□ 0.67
VEGFA-206ENST00000372077 TEX28O15482 410 aa19.21■□□□□ 0.67
VEGFA-206ENST00000372077 SEC24AO95486 1093 aa19.21■□□□□ 0.67
VEGFA-206ENST00000372077 CXCL14O95715 111 aa19.21■□□□□ 0.67
VEGFA-206ENST00000372077 ECHS1P30084 290 aa19.21■□□□□ 0.67
VEGFA-206ENST00000372077 LSP1P33241 339 aa19.21■□□□□ 0.67
VEGFA-206ENST00000372077 DEFB106AQ8N104 65 aa19.21■□□□□ 0.67
VEGFA-206ENST00000372077 ALG3Q92685 438 aa19.21■□□□□ 0.67
VEGFA-206ENST00000372077 SEPT5Q99719 369 aaPredicted RBP19.21■□□□□ 0.67
VEGFA-206ENST00000372077 COMMD8Q9NX08 183 aa19.21■□□□□ 0.67
VEGFA-206ENST00000372077 SNX24Q9Y343 169 aa19.21■□□□□ 0.67
VEGFA-206ENST00000372077 SOAT2O75908 522 aa19.21■□□□□ 0.67
VEGFA-206ENST00000372077 FYNP06241 537 aa19.21■□□□□ 0.67
VEGFA-206ENST00000372077 MATKP42679 507 aa19.21■□□□□ 0.67
VEGFA-206ENST00000372077 ERVFC1P60507 584 aa19.21■□□□□ 0.67
VEGFA-206ENST00000372077 DCAF12L1Q5VU92 463 aa19.21■□□□□ 0.67
VEGFA-206ENST00000372077 TMC7Q7Z402 723 aa19.21■□□□□ 0.67
VEGFA-206ENST00000372077 FAM149B1Q96BN6 582 aa19.21■□□□□ 0.67
VEGFA-206ENST00000372077 CFAP57Q96MR6 1250 aa19.21■□□□□ 0.67
VEGFA-206ENST00000372077 POPDC2Q9HBU9 364 aa19.21■□□□□ 0.67
VEGFA-206ENST00000372077 YBX2Q9Y2T7 364 aaKnown RBP19.21■□□□□ 0.67
VEGFA-206ENST00000372077 FAM92AA1XBS5 289 aa19.2■□□□□ 0.66
VEGFA-206ENST00000372077 PSTPIP1O43586 416 aa19.2■□□□□ 0.66
VEGFA-206ENST00000372077 LRCH4O75427 683 aa19.2■□□□□ 0.66
VEGFA-206ENST00000372077 CNPP09543 421 aaKnown RBP19.2■□□□□ 0.66
VEGFA-206ENST00000372077 DNAJB1P25685 340 aa19.2■□□□□ 0.66
VEGFA-206ENST00000372077 SDC4P31431 198 aa19.2■□□□□ 0.66
VEGFA-206ENST00000372077 GTF2A1P52655 376 aaPredicted RBP19.2■□□□□ 0.66
VEGFA-206ENST00000372077 ERVK-21P61565 698 aa19.2■□□□□ 0.66
VEGFA-206ENST00000372077 LRRC38Q5VT99 294 aa19.2■□□□□ 0.66
VEGFA-206ENST00000372077 RHOT1Q8IXI2 618 aa19.2■□□□□ 0.66
VEGFA-206ENST00000372077 POF1BQ8WVV4 589 aa19.2■□□□□ 0.66
VEGFA-206ENST00000372077 CENPIQ92674 756 aaPredicted RBP19.2■□□□□ 0.66
VEGFA-206ENST00000372077 CAVIN3Q969G5 261 aa19.2■□□□□ 0.66
VEGFA-206ENST00000372077 FAM118BQ9BPY3 351 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms