RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 NUDT5Q9UKK9 219 aa14.7□□□□□ -0.06
HMGCS2-201ENST00000369406 CDY1Q9Y6F8 540 aa14.7□□□□□ -0.06
HMGCS2-201ENST00000369406 C2CD2LO14523 706 aa14.69□□□□□ -0.06
HMGCS2-201ENST00000369406 MAP3K6O95382 1288 aa14.69□□□□□ -0.06
HMGCS2-201ENST00000369406 NCAM1P13591 858 aa14.69□□□□□ -0.06
HMGCS2-201ENST00000369406 IVDP26440 423 aa14.69□□□□□ -0.06
HMGCS2-201ENST00000369406 OTUD4Q01804 1114 aaKnown RBP14.69□□□□□ -0.06
HMGCS2-201ENST00000369406 MTMR3Q13615 1198 aa14.69□□□□□ -0.06
HMGCS2-201ENST00000369406 CASP8Q14790 479 aa14.69□□□□□ -0.06
HMGCS2-201ENST00000369406 OASLQ15646 514 aaKnown RBP14.69□□□□□ -0.06
HMGCS2-201ENST00000369406 PPP6R3Q5H9R7 873 aaPredicted RBP14.69□□□□□ -0.06
HMGCS2-201ENST00000369406 BSPRYQ5W0U4 402 aa14.69□□□□□ -0.06
HMGCS2-201ENST00000369406 KCNT2Q6UVM3 1135 aa14.69□□□□□ -0.06
HMGCS2-201ENST00000369406 STRADAQ7RTN6 431 aa14.69□□□□□ -0.06
HMGCS2-201ENST00000369406 RFX6Q8HWS3 928 aa14.69□□□□□ -0.06
HMGCS2-201ENST00000369406 DCP1BQ8IZD4 617 aaKnown RBP14.69□□□□□ -0.06
HMGCS2-201ENST00000369406 FAM71BQ8TC56 605 aa14.69□□□□□ -0.06
HMGCS2-201ENST00000369406 ACTL9Q8TC94 416 aa14.69□□□□□ -0.06
HMGCS2-201ENST00000369406 TEKT4Q8WW24 435 aa14.69□□□□□ -0.06
HMGCS2-201ENST00000369406 SLCO2A1Q92959 643 aa14.69□□□□□ -0.06
HMGCS2-201ENST00000369406 AP4E1Q9UPM8 1137 aa14.69□□□□□ -0.06
HMGCS2-201ENST00000369406 SNX10Q9Y5X0 201 aa14.69□□□□□ -0.06
HMGCS2-201ENST00000369406 TRANK1O15050 2925 aa14.69□□□□□ -0.06
HMGCS2-201ENST00000369406 FAM187AA6NFU0 413 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 MDM4O15151 490 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 ERLIN1O75477 346 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 TJP3O95049 919 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 TUBBP07437 444 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 LINC00271P0C7V0 271 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 ZSCAN5DPP0CG00 497 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 ALDH7A1P49419 539 aaKnown RBP14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 UBAP2Q5T6F2 1119 aaKnown RBP14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 ERMARDQ5T6L9 678 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 TAC4Q86UU9 113 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 PLD5Q8N7P1 536 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 NETO2Q8NC67 525 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 SLC35B2Q8TB61 432 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 BADQ92934 168 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 DHX35Q9H5Z1 703 aaKnown RBP14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 PNPLA8Q9NP80 782 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 ETNK2Q9NVF9 386 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 FAM53CQ9NYF3 392 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 FZD10Q9ULW2 581 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 MYO7AQ13402 2215 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 REV3LO60673 3130 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 GBF1Q92538 1859 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 WDR27A2RRH5 827 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 OR6C75A6NL08 312 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 FAM72CH0Y354 149 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 CAPN15O75808 1086 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 CPB1P15086 417 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 TNNT3P45378 269 aaPredicted RBP14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 GDF10P55107 478 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 DPYSL2Q16555 572 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 BOLA3Q53S33 107 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 ODF2Q5BJF6 829 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 ANKRD20A8PQ5CZ79 823 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 FAM72AQ5TYM5 149 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 FAM72DQ6L9T8 149 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 FAM72BQ86X60 149 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 SLC39A11Q8N1S5 342 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 CCDC33Q8N5R6 958 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 AUTS2Q8WXX7 1259 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 RIN2Q8WYP3 895 aaPredicted RBP14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 CCDC114Q96M63 670 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 RNF157Q96PX1 679 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 IL23AQ9NPF7 189 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 PCDHB5Q9Y5E4 795 aa14.68□□□□□ -0.06
HMGCS2-201ENST00000369406 ANAPC1Q9H1A4 1944 aa14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 SPDYE4A6NLX3 237 aa14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 ECEL1O95672 775 aa14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 MCM3P25205 808 aa14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 VPS41P49754 854 aa14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 GPR17Q13304 367 aa14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 KRT81Q14533 505 aa14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 FAM43BQ6ZT52 329 aaPredicted RBP14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 ZNF365Q70YC5 407 aa14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 TMEM199Q8N511 208 aa14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 DQX1Q8TE96 717 aaKnown RBP14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 FAF2Q96CS3 445 aa14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 CWC15Q9P013 229 aaKnown RBP14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 UTP11Q9Y3A2 253 aaKnown RBP14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 SHROOM3Q8TF72 1996 aa14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 A0A1W2PQH9 124 aa14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 GOT1P17174 413 aa14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 KLRC2P26717 231 aa14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 RDXP35241 583 aaKnown RBP14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 GGCXP38435 758 aa14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 ROR1Q01973 937 aa14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 DEUP1Q05D60 604 aa14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 DUSP4Q13115 394 aa14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 BYSLQ13895 437 aaKnown RBP14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 BTG3Q14201 252 aaPredicted RBP14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 HLTFQ14527 1009 aaKnown RBP eCLIP14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 NFE2Q16621 373 aaPredicted RBP14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 COLGALT1Q8NBJ5 622 aa14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 FBXO22Q8NEZ5 403 aa14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 MAIP1Q8WWC4 291 aa14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 FUBP3Q96I24 572 aaKnown RBP eCLIP14.67□□□□□ -0.06
HMGCS2-201ENST00000369406 CLSTN3Q9BQT9 956 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms