RNA–Protein interactions for RNA: ENST00000366731.9

MRPL55-205, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2 BASIC

Gene MRPL55, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-205ENST00000366731 EMC10Q5UCC4 262 aa14.33□□□□□ -0.11
MRPL55-205ENST00000366731 SASS6Q6UVJ0 657 aa14.33□□□□□ -0.11
MRPL55-205ENST00000366731 BHLHA9Q7RTU4 235 aa14.33□□□□□ -0.11
MRPL55-205ENST00000366731 CLEC4CQ8WTT0 213 aa14.33□□□□□ -0.11
MRPL55-205ENST00000366731 RNF139Q8WU17 664 aa14.33□□□□□ -0.11
MRPL55-205ENST00000366731 KCTD13Q8WZ19 329 aa14.33□□□□□ -0.11
MRPL55-205ENST00000366731 NELL1Q92832 810 aa14.33□□□□□ -0.11
MRPL55-205ENST00000366731 HHIPQ96QV1 700 aa14.33□□□□□ -0.11
MRPL55-205ENST00000366731 CDK5RAP1Q96SZ6 601 aaKnown RBP14.33□□□□□ -0.11
MRPL55-205ENST00000366731 BBS2Q9BXC9 721 aa14.33□□□□□ -0.11
MRPL55-205ENST00000366731 FAM126AQ9BYI3 521 aaPredicted RBP14.33□□□□□ -0.11
MRPL55-205ENST00000366731 NDST4Q9H3R1 872 aa14.33□□□□□ -0.11
MRPL55-205ENST00000366731 ZDHHC4Q9NPG8 344 aa14.33□□□□□ -0.11
MRPL55-205ENST00000366731 ARHGEF4Q9NR80 690 aa14.33□□□□□ -0.11
MRPL55-205ENST00000366731 ST7Q9NRC1 585 aa14.33□□□□□ -0.11
MRPL55-205ENST00000366731 PLK2Q9NYY3 685 aa14.33□□□□□ -0.11
MRPL55-205ENST00000366731 APEX2Q9UBZ4 518 aa14.33□□□□□ -0.11
MRPL55-205ENST00000366731 SFMBT1Q9UHJ3 866 aa14.33□□□□□ -0.11
MRPL55-205ENST00000366731 AJAP1Q9UKB5 411 aaPredicted RBP14.33□□□□□ -0.11
MRPL55-205ENST00000366731 STRIP2Q9ULQ0 834 aa14.33□□□□□ -0.11
MRPL55-205ENST00000366731 NFE2L3Q9Y4A8 694 aa14.33□□□□□ -0.11
MRPL55-205ENST00000366731 BECN2A8MW95 431 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 KAT7O95251 611 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 APODP05090 189 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 PNMA6AP0CW24 399 aaPredicted RBP14.32□□□□□ -0.12
MRPL55-205ENST00000366731 CORO1AP31146 461 aaKnown RBP14.32□□□□□ -0.12
MRPL55-205ENST00000366731 DAOAP59103 153 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 MIIPQ5JXC2 388 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 PRR23BQ6ZRT6 265 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 ENOSF1Q7L5Y1 443 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 DENND1CQ8IV53 801 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 DCLK2Q8N568 766 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 SUMF1Q8NBK3 374 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 SIX2Q9NPC8 291 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 TAB2Q9NYJ8 693 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 DNAJC12Q9UKB3 198 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 CNTN6Q9UQ52 1028 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 GTPBP10A4D1E9 387 aaKnown RBP14.32□□□□□ -0.12
MRPL55-205ENST00000366731 TBC1D3BA6NDS4 549 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 HOXC11O43248 304 aaPredicted RBP14.32□□□□□ -0.12
MRPL55-205ENST00000366731 HRO43593 1189 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 LILRB5O75023 590 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 TULP3O75386 442 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 GNA15P30679 374 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 TIE1P35590 1138 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 DMC1Q14565 340 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 TCP11X2Q5H9J9 407 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 Q6ZNB5 142 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 C11orf57Q6ZUT1 292 aaPredicted RBP14.32□□□□□ -0.12
MRPL55-205ENST00000366731 FMNL3Q8IVF7 1028 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 SCUBE3Q8IX30 993 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 ZNF276Q8N554 614 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 USP33Q8TEY7 942 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 ZNF606Q8WXB4 792 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 CNGB3Q9NQW8 809 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 DNAJC17Q9NVM6 304 aaKnown RBP14.32□□□□□ -0.12
MRPL55-205ENST00000366731 DEC1Q9P2X7 70 aa14.32□□□□□ -0.12
MRPL55-205ENST00000366731 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.31□□□□□ -0.12
MRPL55-205ENST00000366731 FOXN3O00409 490 aaPredicted RBP14.31□□□□□ -0.12
MRPL55-205ENST00000366731 MSI1O43347 362 aaKnown RBP14.31□□□□□ -0.12
MRPL55-205ENST00000366731 MED7O43513 233 aa14.31□□□□□ -0.12
MRPL55-205ENST00000366731 PAPSS2O95340 614 aaPredicted RBP14.31□□□□□ -0.12
MRPL55-205ENST00000366731 TYRP14679 529 aa14.31□□□□□ -0.12
MRPL55-205ENST00000366731 GRIA2P42262 883 aa14.31□□□□□ -0.12
MRPL55-205ENST00000366731 GPD2P43304 727 aa14.31□□□□□ -0.12
MRPL55-205ENST00000366731 CT47A1Q5JQC4 288 aaPredicted RBP14.31□□□□□ -0.12
MRPL55-205ENST00000366731 RBM43Q6ZSC3 357 aaKnown RBP14.31□□□□□ -0.12
MRPL55-205ENST00000366731 LONP2Q86WA8 852 aa14.31□□□□□ -0.12
MRPL55-205ENST00000366731 PASD1Q8IV76 773 aa14.31□□□□□ -0.12
MRPL55-205ENST00000366731 ETFBKMTQ8IXQ9 262 aa14.31□□□□□ -0.12
MRPL55-205ENST00000366731 ENOX1Q8TC92 643 aaKnown RBP14.31□□□□□ -0.12
MRPL55-205ENST00000366731 HSFY1Q96LI6 401 aa14.31□□□□□ -0.12
MRPL55-205ENST00000366731 VPS16Q9H269 839 aa14.31□□□□□ -0.12
MRPL55-205ENST00000366731 ABCC13Q9NSE7 274 aa14.31□□□□□ -0.12
MRPL55-205ENST00000366731 FANCLQ9NW38 375 aa14.31□□□□□ -0.12
MRPL55-205ENST00000366731 AGO1Q9UL18 857 aaKnown RBP14.31□□□□□ -0.12
MRPL55-205ENST00000366731 SMG5Q9UPR3 1016 aaKnown RBP14.31□□□□□ -0.12
MRPL55-205ENST00000366731 ZFHX2Q9C0A1 2572 aaPredicted RBP14.31□□□□□ -0.12
MRPL55-205ENST00000366731 PATJQ8NI35 1801 aa14.3□□□□□ -0.12
MRPL55-205ENST00000366731 HELZP42694 1942 aaKnown RBP14.3□□□□□ -0.12
MRPL55-205ENST00000366731 FAM170AA1A519 330 aa14.3□□□□□ -0.12
MRPL55-205ENST00000366731 KLF8O95600 359 aaPredicted RBP14.3□□□□□ -0.12
MRPL55-205ENST00000366731 MBD3O95983 291 aa14.3□□□□□ -0.12
MRPL55-205ENST00000366731 EIF2DP41214 584 aaKnown RBP14.3□□□□□ -0.12
MRPL55-205ENST00000366731 KCNMA1Q12791 1236 aa14.3□□□□□ -0.12
MRPL55-205ENST00000366731 RAPGEF1Q13905 1077 aa14.3□□□□□ -0.12
MRPL55-205ENST00000366731 SIM2Q14190 667 aaPredicted RBP14.3□□□□□ -0.12
MRPL55-205ENST00000366731 CCDC183Q5T5S1 534 aa14.3□□□□□ -0.12
MRPL55-205ENST00000366731 GRAMD4Q6IC98 578 aa14.3□□□□□ -0.12
MRPL55-205ENST00000366731 CEP68Q76N32 757 aa14.3□□□□□ -0.12
MRPL55-205ENST00000366731 SYT13Q7L8C5 426 aa14.3□□□□□ -0.12
MRPL55-205ENST00000366731 ALLCQ8N6M5 410 aa14.3□□□□□ -0.12
MRPL55-205ENST00000366731 SHC3Q92529 594 aa14.3□□□□□ -0.12
MRPL55-205ENST00000366731 GOLGA1Q92805 767 aa14.3□□□□□ -0.12
MRPL55-205ENST00000366731 ACDQ96AP0 544 aa14.3□□□□□ -0.12
MRPL55-205ENST00000366731 FAM149B1Q96BN6 582 aa14.3□□□□□ -0.12
MRPL55-205ENST00000366731 ERLEC1Q96DZ1 483 aa14.3□□□□□ -0.12
MRPL55-205ENST00000366731 P2RY11Q96G91 374 aa14.3□□□□□ -0.12
MRPL55-205ENST00000366731 FAM81BQ96LP2 452 aa14.3□□□□□ -0.12
MRPL55-205ENST00000366731 XPO6Q96QU8 1125 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms