RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 PENKP01210 267 aaPredicted RBP20.35■□□□□ 0.85
TRIM58-201ENST00000366481 PROCP04070 461 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 RAG1P15918 1043 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 NCF2P19878 526 aaPredicted RBP20.35■□□□□ 0.85
TRIM58-201ENST00000366481 TGFB2P61812 414 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 MMRN1Q13201 1228 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 BMPR2Q13873 1038 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 CYLC2Q14093 348 aaPredicted RBP20.35■□□□□ 0.85
TRIM58-201ENST00000366481 ARPINQ7Z6K5 226 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 FAM172AQ8WUF8 416 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 ACAD9Q9H845 621 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 ARHGEF4Q9NR80 690 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 ELK3P41970 407 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 FOLH1Q04609 750 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 PTPN20Q4JDL3 420 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 C1orf228Q6PIY5 440 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 B3GNT6Q6ZMB0 384 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 DENND5BQ6ZUT9 1274 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 RSPH3Q86UC2 560 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 ZBED3Q96IU2 234 aaPredicted RBP20.35■□□□□ 0.85
TRIM58-201ENST00000366481 EBF4Q9BQW3 602 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 CCDC28BQ9BUN5 200 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 KCNK4Q9NYG8 393 aa20.35■□□□□ 0.85
TRIM58-201ENST00000366481 F5H423 210 aaPredicted RBP20.34■□□□□ 0.85
TRIM58-201ENST00000366481 TGDSO95455 350 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 C1QBPQ07021 282 aaKnown RBP20.34■□□□□ 0.85
TRIM58-201ENST00000366481 UNC45BQ8IWX7 931 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 ZNF276Q8N554 614 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 TEX13BQ9BXU2 312 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 RNF19AQ9NV58 838 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 HMGXB4Q9UGU5 601 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 ADAMTS6Q9UKP5 1117 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 FAF1Q9UNN5 650 aaPredicted RBP20.34■□□□□ 0.85
TRIM58-201ENST00000366481 SPATA31C2B4DYI2 1134 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 ATXN3P54252 364 aaPredicted RBP20.34■□□□□ 0.85
TRIM58-201ENST00000366481 MAP3K10Q02779 954 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 ANGEL2Q5VTE6 544 aaKnown RBP20.34■□□□□ 0.85
TRIM58-201ENST00000366481 RBM12BQ8IXT5 1001 aaKnown RBP20.34■□□□□ 0.85
TRIM58-201ENST00000366481 ARFGAP1Q8N6T3 406 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 DCAKDQ8WVC6 231 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 NCSTNQ92542 709 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 SUDS3Q9H7L9 328 aaPredicted RBP20.34■□□□□ 0.85
TRIM58-201ENST00000366481 TTC36A6NLP5 189 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 INO80B-WBP1J3KQ70 363 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 ADCY3O60266 1144 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 PMLP29590 882 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 CDKN2BP42772 138 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 PEX6Q13608 980 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 TNFAIP1Q13829 316 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 CNGA3Q16281 694 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 HSP90AA5PQ58FG0 334 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 TFDP3Q5H9I0 405 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 KLC3Q6P597 504 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 REPS2Q8NFH8 660 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 PCYT2Q99447 389 aa20.34■□□□□ 0.85
TRIM58-201ENST00000366481 INO80BQ9C086 356 aaPredicted RBP20.34■□□□□ 0.85
TRIM58-201ENST00000366481 DHX33Q9H6R0 707 aaKnown RBP20.34■□□□□ 0.85
TRIM58-201ENST00000366481 UBA1P22314 1058 aaKnown RBP20.33■□□□□ 0.85
TRIM58-201ENST00000366481 PSMC1P62191 440 aaKnown RBP20.33■□□□□ 0.85
TRIM58-201ENST00000366481 IGBP1P78318 339 aa20.33■□□□□ 0.85
TRIM58-201ENST00000366481 ZNF699Q32M78 642 aa20.33■□□□□ 0.85
TRIM58-201ENST00000366481 PCGF5Q86SE9 256 aa20.33■□□□□ 0.85
TRIM58-201ENST00000366481 TMEM35BQ8NCS4 154 aa20.33■□□□□ 0.85
TRIM58-201ENST00000366481 CATSPER2Q96P56 530 aa20.33■□□□□ 0.85
TRIM58-201ENST00000366481 PCDH9Q9HC56 1237 aa20.33■□□□□ 0.85
TRIM58-201ENST00000366481 DTNAQ9Y4J8 743 aa20.33■□□□□ 0.85
TRIM58-201ENST00000366481 MYOCOSA0A1B0GUC4 107 aa20.33■□□□□ 0.84
TRIM58-201ENST00000366481 SPDYE16A6NNV3 312 aaPredicted RBP20.33■□□□□ 0.84
TRIM58-201ENST00000366481 MAGEB3O15480 346 aa20.33■□□□□ 0.84
TRIM58-201ENST00000366481 DKC1O60832 514 aaKnown RBP eCLIP20.33■□□□□ 0.84
TRIM58-201ENST00000366481 ZMPSTE24O75844 475 aa20.33■□□□□ 0.84
TRIM58-201ENST00000366481 STAM2O75886 525 aa20.33■□□□□ 0.84
TRIM58-201ENST00000366481 GHRHRQ02643 423 aa20.33■□□□□ 0.84
TRIM58-201ENST00000366481 ACAP1Q15027 740 aa20.33■□□□□ 0.84
TRIM58-201ENST00000366481 STXBP2Q15833 593 aa20.33■□□□□ 0.84
TRIM58-201ENST00000366481 MAP3K21Q5TCX8 1036 aa20.33■□□□□ 0.84
TRIM58-201ENST00000366481 CDHR3Q6ZTQ4 885 aa20.33■□□□□ 0.84
TRIM58-201ENST00000366481 RFX6Q8HWS3 928 aa20.33■□□□□ 0.84
TRIM58-201ENST00000366481 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.33■□□□□ 0.84
TRIM58-201ENST00000366481 UBA3Q8TBC4 463 aa20.33■□□□□ 0.84
TRIM58-201ENST00000366481 SSU72Q9NP77 194 aaKnown RBP20.33■□□□□ 0.84
TRIM58-201ENST00000366481 STRIP2Q9ULQ0 834 aa20.33■□□□□ 0.84
TRIM58-201ENST00000366481 KBTBD13C9JR72 458 aa20.32■□□□□ 0.84
TRIM58-201ENST00000366481 ASS1P00966 412 aaKnown RBP20.32■□□□□ 0.84
TRIM58-201ENST00000366481 KRT3P12035 628 aa20.32■□□□□ 0.84
TRIM58-201ENST00000366481 NAMPTP43490 491 aa20.32■□□□□ 0.84
TRIM58-201ENST00000366481 CLDN10P78369 228 aa20.32■□□□□ 0.84
TRIM58-201ENST00000366481 CPT1BQ92523 772 aa20.32■□□□□ 0.84
TRIM58-201ENST00000366481 PRPF18Q99633 342 aaKnown RBP20.32■□□□□ 0.84
TRIM58-201ENST00000366481 WDR83Q9BRX9 315 aaKnown RBP20.32■□□□□ 0.84
TRIM58-201ENST00000366481 TRIM56Q9BRZ2 755 aaKnown RBP20.32■□□□□ 0.84
TRIM58-201ENST00000366481 TMEM63AO94886 807 aa20.32■□□□□ 0.84
TRIM58-201ENST00000366481 TBXAS1P24557 533 aaPredicted RBP20.32■□□□□ 0.84
TRIM58-201ENST00000366481 TCF7P36402 384 aaPredicted RBP20.32■□□□□ 0.84
TRIM58-201ENST00000366481 STAT5BP51692 787 aa20.32■□□□□ 0.84
TRIM58-201ENST00000366481 TMEM259Q4ZIN3 620 aa20.32■□□□□ 0.84
TRIM58-201ENST00000366481 TRIM72Q6ZMU5 477 aa20.32■□□□□ 0.84
TRIM58-201ENST00000366481 IGDCC3Q8IVU1 814 aa20.32■□□□□ 0.84
TRIM58-201ENST00000366481 RDM1Q8NG50 284 aa20.32■□□□□ 0.84
TRIM58-201ENST00000366481 NDUFA13Q9P0J0 144 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms