RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 ENDOUP21128 410 aaKnown RBP13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 GCLMP48507 274 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 HSD17B4P51659 736 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 MRPS22P82650 360 aaKnown RBP13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 NSUN2Q08J23 767 aaKnown RBP eCLIP13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 ALCAMQ13740 583 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 ASPRV1Q53RT3 343 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 ANKRD22Q5VYY1 191 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 EEPD1Q7L9B9 569 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 IFNLR1Q8IU57 520 aaPredicted RBP13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 CPNE9Q8IYJ1 553 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 RCOR2Q8IZ40 523 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 APBB2Q92870 758 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 PKP2Q99959 881 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 RTKNQ9BST9 563 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 OSBPL11Q9BXB4 747 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 EHD1Q9H4M9 534 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 DHX33Q9H6R0 707 aaKnown RBP13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 PARVGQ9HBI0 331 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 KCNQ5Q9NR82 932 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 FRMPD2Q68DX3 1309 aaPredicted RBP13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 ARHGEF37A1IGU5 675 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 CYB561D2O14569 222 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 TBX3O15119 743 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 PPP1R11O60927 126 aaPredicted RBP13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 GABRB3P28472 473 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 BMXP51813 675 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 E2F2Q14209 437 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 TMEM102Q8N9M5 508 aaPredicted RBP13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 DLG3Q92796 817 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 RPGRQ92834 1020 aaKnown RBP13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 SERPINI1Q99574 410 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 SH3GL1Q99961 368 aa13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 RPF2Q9H7B2 306 aaKnown RBP13.75□□□□□ -0.21
SPTSSB-201ENST00000359175 TCRBV9S1A1TA0A576 114 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 KRBA1A5PL33 1030 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 TMX2-CTNND1H3BSU7 103 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 GNPATO15228 680 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 KRT10P13645 584 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 C1orf220Q5T0J3 134 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 ANGEL2Q5VTE6 544 aaKnown RBP13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 XKR5Q6UX68 686 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 LYSMD3Q7Z3D4 306 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 PSD2Q9BQI7 771 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 FAM96AQ9H5X1 160 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 IFT122Q9HBG6 1241 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 XPNPEP1Q9NQW7 623 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 ERVK-11Q9UQG0 969 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 SLC30A1Q9Y6M5 507 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 C7orf72A4D263 438 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 TRIM49D1C9J1S8 452 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 SGK1O00141 431 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 TCEA1P23193 301 aaKnown RBP13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 NR1D2Q14995 579 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 KAZNQ674X7 775 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 SLC26A11Q86WA9 606 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 PDIK1LQ8N165 341 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 NACC2Q96BF6 587 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 ZNF778Q96MU6 729 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 SLITRK1Q96PX8 696 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 SHCBP1LQ9BZQ2 653 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 CEP44Q9C0F1 390 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 DNAJC28Q9NX36 388 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 QPCTLQ9NXS2 382 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 VPS28Q9UK41 221 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 CDC14AQ9UNH5 594 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 PCDHB2Q9Y5E7 798 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 ZHX2Q9Y6X8 837 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 NAV1Q8NEY1 1877 aa13.74□□□□□ -0.21
SPTSSB-201ENST00000359175 CFAP99D6REC4 459 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 KDM1AO60341 852 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 COL4A1P02462 1669 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 SNRPAP09012 282 aaKnown RBP13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 COX4I1P13073 169 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 PCYT1AP49585 367 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 DPYSQ14117 519 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 FLOT2Q14254 428 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 SF3B4Q15427 424 aaKnown RBP eCLIP13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 PDPK2PQ6A1A2 396 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 C1orf186Q6ZWK4 172 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 TERB1Q8NA31 727 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 USP33Q8TEY7 942 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 TAMM41Q96BW9 452 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 OTUD5Q96G74 571 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 TMEM121Q9BTD3 319 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 JMJD4Q9H9V9 463 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 SIAEQ9HAT2 523 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 ITM2BQ9Y287 266 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 AP4S1Q9Y587 144 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 A0A087WXM4 84 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 LOC100653049A0A140TA62 436 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 H3BMQ9 156 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 KPNA4O00629 521 aaPredicted RBP13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 KRT34O76011 436 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 IFNB1P01574 187 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 EIF2AK2P19525 551 aaKnown RBP13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 PEX3P56589 373 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 BBS9Q3SYG4 887 aa13.73□□□□□ -0.21
SPTSSB-201ENST00000359175 PLA2G4FQ68DD2 849 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms