RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 KRCC1Q9NPI7 259 aaPredicted RBP9.02□□□□□ -0.97
COL6A6-201ENST00000358511 FAM217BQ9NTX9 383 aaPredicted RBP9.02□□□□□ -0.97
COL6A6-201ENST00000358511 NEURL4Q96JN8 1562 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 CRB1P82279 1406 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 C15orf38-AP3S2A0A0A6YYH1 394 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 SAGE2PA6NJ88 616 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 RGS4P49798 205 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 FOLH1Q04609 750 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 ARPINQ7Z6K5 226 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 STN1Q9H668 368 aaKnown RBP9.02□□□□□ -0.97
COL6A6-201ENST00000358511 LOC102724428A0A0B4J2F2 783 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 EEF2KO00418 725 aaKnown RBP9.02□□□□□ -0.97
COL6A6-201ENST00000358511 DDX3XO00571 662 aaKnown RBP eCLIP9.02□□□□□ -0.97
COL6A6-201ENST00000358511 SIK1P57059 783 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 ATG16L2Q8NAA4 619 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 NAT14Q8WUY8 206 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 SKA1Q96BD8 255 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 DGCR6LQ9BY27 220 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 TSR3Q9UJK0 312 aaKnown RBP9.02□□□□□ -0.97
COL6A6-201ENST00000358511 PKP3Q9Y446 797 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 FAM20BO75063 409 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 CPA3P15088 417 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 GPD1P21695 349 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 CCT8P50990 548 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 NFYCQ13952 458 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 RNF220Q5VTB9 566 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 OTOAQ7RTW8 1153 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 STRA8Q7Z7C7 330 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 DAGLBQ8NCG7 672 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 APPL2Q8NEU8 664 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 ZSCAN18Q8TBC5 510 aaPredicted RBP9.02□□□□□ -0.97
COL6A6-201ENST00000358511 SGF29Q96ES7 293 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 MLPHQ9BV36 600 aaPredicted RBP9.02□□□□□ -0.97
COL6A6-201ENST00000358511 RMND5AQ9H871 391 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 C8orf4Q9NR00 106 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 INTS13Q9NVM9 706 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 GABBR1Q9UBS5 961 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 ZNF180Q9UJW8 692 aa9.02□□□□□ -0.97
COL6A6-201ENST00000358511 EIF3LQ9Y262 564 aaKnown RBP9.02□□□□□ -0.97
COL6A6-201ENST00000358511 UBAP1LF5GYI3 381 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 FOXN3O00409 490 aaPredicted RBP9.01□□□□□ -0.97
COL6A6-201ENST00000358511 SOAT2O75908 522 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 RGS20O76081 388 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 MYL4P12829 197 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 UQCRBP14927 111 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 PDK2Q15119 407 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 PKN3Q6P5Z2 889 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 SULF1Q8IWU6 871 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 TNIP3Q96KP6 325 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 MTG1Q9BT17 334 aaPredicted RBP9.01□□□□□ -0.97
COL6A6-201ENST00000358511 TRIM39Q9HCM9 518 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 RPRD1BQ9NQG5 326 aaKnown RBP9.01□□□□□ -0.97
COL6A6-201ENST00000358511 LATS2Q9NRM7 1088 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 CCDC88CQ9P219 2028 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 HMGB3O15347 200 aaKnown RBP9.01□□□□□ -0.97
COL6A6-201ENST00000358511 PGK2P07205 417 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 TKTP29401 623 aaKnown RBP9.01□□□□□ -0.97
COL6A6-201ENST00000358511 GTF2H1P32780 548 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 NCALDP61601 193 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 GPAT2Q6NUI2 795 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 NT5DC3Q86UY8 548 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 NUAK2Q9H093 628 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 CCDC59Q9P031 241 aaKnown RBP9.01□□□□□ -0.97
COL6A6-201ENST00000358511 AFF4Q9UHB7 1163 aaKnown RBP9.01□□□□□ -0.97
COL6A6-201ENST00000358511 CDK7P50613 346 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 FRG1Q14331 258 aaKnown RBP9.01□□□□□ -0.97
COL6A6-201ENST00000358511 DOK7Q18PE1 504 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 RC3H1Q5TC82 1133 aaKnown RBP9.01□□□□□ -0.97
COL6A6-201ENST00000358511 ATG9AQ7Z3C6 839 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 C16orf62Q7Z3J2 963 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 HPS1Q92902 700 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 EHD3Q9NZN3 535 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 PCYOX1Q9UHG3 505 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 ANKRD6Q9Y2G4 727 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 TRIM43BA6NCK2 446 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 EFCAB10A6NFE3 127 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 DGAT1O75907 488 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 ZNF682O95780 498 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 MPOP05164 745 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 RXRGP48443 463 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 FASTKQ14296 549 aaKnown RBP9.01□□□□□ -0.97
COL6A6-201ENST00000358511 N4BP2L1Q5TBK1 243 aaPredicted RBP9.01□□□□□ -0.97
COL6A6-201ENST00000358511 LMBRD2Q68DH5 695 aaPredicted RBP9.01□□□□□ -0.97
COL6A6-201ENST00000358511 ATG14Q6ZNE5 492 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 C8orf59Q8N0T1 100 aaPredicted RBP9.01□□□□□ -0.97
COL6A6-201ENST00000358511 PTGES3LE9PB15 166 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 GUCY1B2O75343 617 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 GUCA1CO95843 209 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 PTPN7P35236 360 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 CDRT15Q96T59 188 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 UGT2B28Q9BY64 529 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 ZNF341Q9BYN7 854 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 SEMA6AQ9H2E6 1030 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 AGPAT3Q9NRZ7 376 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 EXTL3O43909 919 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 BBOX1O75936 387 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 TOB1P50616 345 aaPredicted RBP9.01□□□□□ -0.97
COL6A6-201ENST00000358511 ZC2HC1CQ53FD0 456 aaPredicted RBP9.01□□□□□ -0.97
COL6A6-201ENST00000358511 MZT2BQ6NZ67 158 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 DSTYKQ6XUX3 929 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms