RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 DEFB128Q7Z7B8 93 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 LRRC52Q8N7C0 313 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 C12orf29Q8N999 325 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 BEST2Q8NFU1 509 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 PIWIL1Q96J94 861 aaKnown RBP14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 TACO1Q9BSH4 297 aaKnown RBP14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 CDHR5Q9HBB8 845 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 TUBGCP4Q9UGJ1 667 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 GINS2Q9Y248 185 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 SNX9Q9Y5X1 595 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 SCN1AP35498 2009 aa14.88□□□□□ -0.03
NIPAL3-203ENST00000358028 SMIM35A0A1B0GVV1 85 aa14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 MCF2LO15068 1137 aa14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 GCAP28676 217 aa14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 PHBP35232 272 aa14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 CDH6P55285 790 aa14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 ARL4CP56559 192 aa14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 ELF3P78545 371 aaPredicted RBP14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 SPARCL1Q14515 664 aa14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 C15orf59Q2T9L4 293 aaPredicted RBP14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 PKDCCQ504Y2 493 aa14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 ZC3H12AQ5D1E8 599 aaKnown RBP14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 NOTUMQ6P988 496 aa14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 ACOT1Q86TX2 421 aa14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 TTC30AQ86WT1 665 aa14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 UNC45BQ8IWX7 931 aa14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 ZBED8Q8IZ13 594 aa14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 NAT8LQ8N9F0 302 aa14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 GDAP1Q8TB36 358 aa14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 CPT1BQ92523 772 aa14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 OSMRQ99650 979 aa14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 VPS37BQ9H9H4 285 aa14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 RXFP1Q9HBX9 757 aa14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 ABCF3Q9NUQ8 709 aa14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 NME7Q9Y5B8 376 aa14.87□□□□□ -0.03
NIPAL3-203ENST00000358028 PRPSAP2O60256 369 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 NBNO60934 754 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 GRAP2O75791 330 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 ASMTLO95671 621 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 DARSP14868 501 aaKnown RBP14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 TAC1P20366 129 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 SLC8A1P32418 973 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 SKIV2L2P42285 1042 aaKnown RBP14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 BNIP1Q12981 228 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 MMRN1Q13201 1228 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 TFDP2Q14188 446 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 PCBP1Q15365 356 aaKnown RBP eCLIP14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 HIF1AQ16665 826 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 CCDC14Q49A88 953 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 RAB6CQ53S08 254 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 EFHC2Q5JST6 749 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 HP1BP3Q5SSJ5 553 aaPredicted RBP14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 ANKRD22Q5VYY1 191 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 PMF1Q6P1K2 205 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 OLFML1Q6UWY5 402 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 DENND1AQ8TEH3 1009 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 C18orf25Q96B23 403 aaPredicted RBP14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 SMC6Q96SB8 1091 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 MAK16Q9BXY0 300 aaKnown RBP14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 SLC4A5Q9BY07 1137 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 RAB6CQ9H0N0 254 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 TRABDQ9H4I3 376 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 IL23AQ9NPF7 189 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 FAM49BQ9NUQ9 324 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 CNTN3Q9P232 1028 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 KLHL14Q9P2G3 628 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 PSMC3IPQ9P2W1 217 aaPredicted RBP14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 STARD13Q9Y3M8 1113 aa14.86□□□□□ -0.03
NIPAL3-203ENST00000358028 GOLGA8MH3BSY2 632 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 UBOX5O94941 541 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 CHRNA1P02708 482 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 RBP3P10745 1247 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 SLC6A3Q01959 620 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 ROR1Q01973 937 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 MGAT3Q09327 533 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 DPYSL3Q14195 570 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 NOMO1Q15155 1222 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 SHHQ15465 462 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 CDO1Q16878 200 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 ALKAL1Q6UXT8 129 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 CCDC91Q7Z6B0 441 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 RPAINQ86UA6 219 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 UNC93AQ86WB7 457 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 ATP11CQ8NB49 1132 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 HESX1Q9UBX0 185 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 HES2Q9Y543 173 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 E7ESA3 106 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 POC1B-GALNT4F8VUJ3 575 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 BANF1O75531 89 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 RECQL4O94761 1208 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 WDR4P57081 412 aaKnown RBP14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 GAD2Q05329 585 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 CBLBQ13191 982 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 KRT81Q14533 505 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 PDK2Q15119 407 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 KLHL38Q2WGJ6 581 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 FAM133BQ5BKY9 247 aaKnown RBP14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 GLRA4Q5JXX5 417 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 TMEM240Q5SV17 173 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms