RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 MDGA1Q8NFP4 955 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 CLEC4CQ8WTT0 213 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 BHMTQ93088 406 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 ERLEC1Q96DZ1 483 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 NT5C1BQ96P26 610 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 ACOX2Q99424 681 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 GTPBP4Q9BZE4 634 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 UBXN6Q9BZV1 441 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 ACP6Q9NPH0 428 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 RXFP3Q9NSD7 469 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 CLIC5Q9NZA1 410 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 DNMT3LQ9UJW3 386 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 AJAP1Q9UKB5 411 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 GMEB2Q9UKD1 530 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 CLEC4EQ9ULY5 219 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 USP18Q9UMW8 372 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 PCDHB4Q9Y5E5 795 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 CCDC163A0A0D9SF12 145 aa17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 YJEFN3A6XGL0 299 aa17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 PRRT4C9JH25 899 aa17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 E7ENQ6 273 aa17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 NEDD8-MDP1E9PL57 170 aa17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 XPO1O14980 1071 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 GDF9O60383 454 aa17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 APODP05090 189 aa17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 RETP07949 1114 aa17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 CISD3P0C7P0 127 aa17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 VDRP11473 427 aa17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 CNR2P34972 360 aa17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 BCAT1P54687 386 aa17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 YWHAGP61981 247 aaKnown RBP eCLIP17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 BST2Q10589 180 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 PMF1Q6P1K2 205 aa17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 RASSF3Q86WH2 238 aa17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 ZNF276Q8N554 614 aa17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 RBBP8NLQ8NC74 664 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 ACDQ96AP0 544 aa17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 DUSP15Q9H1R2 295 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 DLL3Q9NYJ7 618 aa17.56■□□□□ 0.4
PDLIM7-201ENST00000355572 ADAMTS9Q9P2N4 1935 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 BICDL2A1A5D9 508 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 CACNG3O60359 315 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 APBB3O95704 486 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 ZBED1O96006 694 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 TYRP14679 529 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 TBXAS1P24557 533 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 PPP1R2P41236 205 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 GRIA2P42262 883 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 WASP42768 502 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 PLA2G4AP47712 749 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 DGKEP52429 567 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 SF3A2Q15428 464 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 CRY1Q16526 586 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 PLK5Q496M5 336 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 EGFLAMQ63HQ2 1017 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 ANO7Q6IWH7 933 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 LCLAT1Q6UWP7 414 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 TTC39CQ8N584 583 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 TERB1Q8NA31 727 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 SLC35F5Q8WV83 523 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 EDEM1Q92611 657 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 SECISBP2LQ93073 1101 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 BBS2Q9BXC9 721 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 INTS2Q9H0H0 1204 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 ARRDC1-AS1Q9H2J1 176 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 FAM124BQ9H5Z6 455 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 CD248Q9HCU0 757 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 SEMA4GQ9NTN9 838 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 DNAJC17Q9NVM6 304 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 MARK1Q9P0L2 795 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 SFMBT1Q9UHJ3 866 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 RAB23Q9ULC3 237 aa17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.55■□□□□ 0.4
PDLIM7-201ENST00000355572 CKAP5Q14008 2032 aa17.54■□□□□ 0.4
PDLIM7-201ENST00000355572 MED19A0JLT2 244 aaPredicted RBP17.54■□□□□ 0.4
PDLIM7-201ENST00000355572 MSI1O43347 362 aaKnown RBP17.54■□□□□ 0.4
PDLIM7-201ENST00000355572 AFPP02771 609 aaKnown RBP17.54■□□□□ 0.4
PDLIM7-201ENST00000355572 CCDC192P0DO97 292 aa17.54■□□□□ 0.4
PDLIM7-201ENST00000355572 LCP1P13796 627 aa17.54■□□□□ 0.4
PDLIM7-201ENST00000355572 TRIM21P19474 475 aaKnown RBP17.54■□□□□ 0.4
PDLIM7-201ENST00000355572 CORO1AP31146 461 aaKnown RBP17.54■□□□□ 0.4
PDLIM7-201ENST00000355572 MRPS21P82921 87 aaKnown RBP17.54■□□□□ 0.4
PDLIM7-201ENST00000355572 C10orf76Q5T2E6 689 aa17.54■□□□□ 0.4
PDLIM7-201ENST00000355572 FYB2Q5VWT5 728 aa17.54■□□□□ 0.4
PDLIM7-201ENST00000355572 TRIML1Q8N9V2 468 aa17.54■□□□□ 0.4
PDLIM7-201ENST00000355572 TSTD1Q8NFU3 115 aa17.54■□□□□ 0.4
PDLIM7-201ENST00000355572 RLN3Q8WXF3 142 aa17.54■□□□□ 0.4
PDLIM7-201ENST00000355572 CNOT6LQ96LI5 555 aaKnown RBP17.54■□□□□ 0.4
PDLIM7-201ENST00000355572 CRACR2AQ9BSW2 395 aa17.54■□□□□ 0.4
PDLIM7-201ENST00000355572 MARCH2Q9P0N8 246 aa17.54■□□□□ 0.4
PDLIM7-201ENST00000355572 EBF1Q9UH73 591 aa17.54■□□□□ 0.4
PDLIM7-201ENST00000355572 RWDD2AQ9UIY3 292 aa17.54■□□□□ 0.4
PDLIM7-201ENST00000355572 AGO1Q9UL18 857 aaKnown RBP17.54■□□□□ 0.4
PDLIM7-201ENST00000355572 SLC12A8A0AV02 714 aa17.53■□□□□ 0.4
PDLIM7-201ENST00000355572 TBC1D3BA6NDS4 549 aa17.53■□□□□ 0.4
PDLIM7-201ENST00000355572 BECN2A8MW95 431 aa17.53■□□□□ 0.4
PDLIM7-201ENST00000355572 P4HA2O15460 535 aa17.53■□□□□ 0.4
PDLIM7-201ENST00000355572 EPN2O95208 641 aa17.53■□□□□ 0.4
PDLIM7-201ENST00000355572 PAEPP09466 180 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms