RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 GLYCTKQ8IVS8 523 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 KBTBD2Q8IY47 623 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 SLC7A5P1Q8MH63 180 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 PDCD7Q8N8D1 485 aaKnown RBP10.52□□□□□ -0.73
SYNE1-203ENST00000354674 PTPRN2Q92932 1015 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 LPPQ93052 612 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 MRRFQ96E11 262 aaKnown RBP10.52□□□□□ -0.73
SYNE1-203ENST00000354674 WNT8AQ9H1J5 351 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 ACP6Q9NPH0 428 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 SLC38A7Q9NVC3 462 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 MIOSQ9NXC5 875 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 GDAP2Q9NXN4 497 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 CTNNAL1Q9UBT7 734 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 EFR3BQ9Y2G0 817 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 TMEM98Q9Y2Y6 226 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 SNX24Q9Y343 169 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 PCDHB4Q9Y5E5 795 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 P4HA1P13674 534 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 TUFMP49411 452 aaKnown RBP10.52□□□□□ -0.73
SYNE1-203ENST00000354674 AFF1P51825 1210 aaKnown RBP10.52□□□□□ -0.73
SYNE1-203ENST00000354674 ZNF362Q5T0B9 420 aaPredicted RBP10.52□□□□□ -0.73
SYNE1-203ENST00000354674 ALKBH5Q6P6C2 394 aaKnown RBP10.52□□□□□ -0.73
SYNE1-203ENST00000354674 UTS2BQ765I0 119 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 CRIPAKQ8N1N5 446 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 MREGQ8N565 214 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 IFT43Q96FT9 208 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 PCDHB18PQ96TA0 734 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 GAD1Q99259 594 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 ISCUQ9H1K1 167 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 HIPK3Q9H422 1215 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 RSAD1Q9HA92 442 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 RNF14Q9UBS8 474 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 NR2E1Q9Y466 385 aa10.52□□□□□ -0.73
SYNE1-203ENST00000354674 TMEM221A6NGB7 291 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 TXNDC9O14530 226 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 TFPTP0C1Z6 253 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 GZMAP12544 262 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 KRT5P13647 590 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 TNFAIP3P21580 790 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 PNPLA4P41247 253 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 TMEM214Q6NUQ4 689 aaKnown RBP10.51□□□□□ -0.73
SYNE1-203ENST00000354674 IRGCQ6NXR0 463 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 TMEM270Q6UE05 265 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 FAM136AQ96C01 138 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 NUP85Q9BW27 656 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 ELAC1Q9H777 363 aaKnown RBP10.51□□□□□ -0.73
SYNE1-203ENST00000354674 RNF19AQ9NV58 838 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 KLHL14Q9P2G3 628 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 CILPO75339 1184 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 THP07101 528 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 WEE2P0C1S8 567 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 RXRGP48443 463 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 TSPY1Q01534 308 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 TCTN1Q2MV58 587 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 TTC39CQ8N584 583 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 USP33Q8TEY7 942 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 SEMA4AQ9H3S1 761 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 SMYD3Q9H7B4 428 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 NXF1Q9UBU9 619 aaKnown RBP10.51□□□□□ -0.73
SYNE1-203ENST00000354674 SCN1AP35498 2009 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 ENPP3O14638 875 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 LYNP07948 512 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 PAEPP09466 180 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 ACADSP16219 412 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 KPNB1Q14974 876 aaKnown RBP10.51□□□□□ -0.73
SYNE1-203ENST00000354674 LRRC26Q2I0M4 334 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 UBE2Q1Q7Z7E8 422 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 ZBTB46Q86UZ6 589 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 VWCEQ96DN2 955 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 PAWRQ96IZ0 340 aaKnown RBP10.51□□□□□ -0.73
SYNE1-203ENST00000354674 ZNF560Q96MR9 790 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 TRAPPC9Q96Q05 1148 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 TTC1Q99614 292 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 LUC7LQ9NQ29 371 aaKnown RBP10.51□□□□□ -0.73
SYNE1-203ENST00000354674 TMCO1Q9UM00 188 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 LRCH1Q9Y2L9 728 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 TSC22D4Q9Y3Q8 395 aa10.51□□□□□ -0.73
SYNE1-203ENST00000354674 USP1O94782 785 aa10.5□□□□□ -0.73
SYNE1-203ENST00000354674 UNGP13051 313 aaPredicted RBP10.5□□□□□ -0.73
SYNE1-203ENST00000354674 RPL9P32969 192 aaKnown RBP10.5□□□□□ -0.73
SYNE1-203ENST00000354674 AGBL2Q5U5Z8 902 aa10.5□□□□□ -0.73
SYNE1-203ENST00000354674 DENND2CQ68D51 928 aa10.5□□□□□ -0.73
SYNE1-203ENST00000354674 LRIG3Q6UXM1 1119 aa10.5□□□□□ -0.73
SYNE1-203ENST00000354674 ASRGL1Q7L266 308 aa10.5□□□□□ -0.73
SYNE1-203ENST00000354674 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.5□□□□□ -0.73
SYNE1-203ENST00000354674 DBF4BQ8NFT6 615 aa10.5□□□□□ -0.73
SYNE1-203ENST00000354674 SEPT8Q92599 483 aa10.5□□□□□ -0.73
SYNE1-203ENST00000354674 RAB3IPQ96QF0 476 aaPredicted RBP10.5□□□□□ -0.73
SYNE1-203ENST00000354674 SMC6Q96SB8 1091 aa10.5□□□□□ -0.73
SYNE1-203ENST00000354674 GOLGA2P5Q9HBQ8 144 aa10.5□□□□□ -0.73
SYNE1-203ENST00000354674 SH3GLB1Q9Y371 365 aa10.5□□□□□ -0.73
SYNE1-203ENST00000354674 SCN5AQ14524 2016 aa10.5□□□□□ -0.73
SYNE1-203ENST00000354674 A0A1W2PQ67 120 aa10.5□□□□□ -0.73
SYNE1-203ENST00000354674 TMEM120BA0PK00 339 aa10.5□□□□□ -0.73
SYNE1-203ENST00000354674 ACSL3O95573 720 aa10.5□□□□□ -0.73
SYNE1-203ENST00000354674 ASLP04424 464 aa10.5□□□□□ -0.73
SYNE1-203ENST00000354674 RAP1GAPP47736 663 aa10.5□□□□□ -0.73
SYNE1-203ENST00000354674 SCNN1GP51170 649 aa10.5□□□□□ -0.73
SYNE1-203ENST00000354674 CDH8P55286 799 aa10.5□□□□□ -0.73
SYNE1-203ENST00000354674 OXCT1P55809 520 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms