RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 FAXCQ5TGI0 409 aa22.96■■□□□ 1.27
UPF3A-201ENST00000351487 LRRC6Q86X45 466 aa22.96■■□□□ 1.27
UPF3A-201ENST00000351487 ANKRD52Q8NB46 1076 aa22.96■■□□□ 1.27
UPF3A-201ENST00000351487 PTPRN2Q92932 1015 aa22.96■■□□□ 1.27
UPF3A-201ENST00000351487 UTP4Q969X6 686 aaKnown RBP22.96■■□□□ 1.27
UPF3A-201ENST00000351487 DPEP3Q9H4B8 488 aa22.96■■□□□ 1.27
UPF3A-201ENST00000351487 UBQLN1Q9UMX0 589 aaKnown RBP22.96■■□□□ 1.27
UPF3A-201ENST00000351487 STK38LQ9Y2H1 464 aa22.96■■□□□ 1.27
UPF3A-201ENST00000351487 A8MXQ7 604 aa22.96■■□□□ 1.27
UPF3A-201ENST00000351487 IL1BP01584 269 aa22.96■■□□□ 1.27
UPF3A-201ENST00000351487 TARSP26639 723 aaKnown RBP22.96■■□□□ 1.27
UPF3A-201ENST00000351487 NR2C2P49116 596 aa22.96■■□□□ 1.27
UPF3A-201ENST00000351487 PLEKHG4Q58EX7 1191 aa22.96■■□□□ 1.27
UPF3A-201ENST00000351487 CRYBG2Q8N1P7 616 aa22.96■■□□□ 1.27
UPF3A-201ENST00000351487 CCDC110Q8TBZ0 833 aa22.96■■□□□ 1.27
UPF3A-201ENST00000351487 KBTBD7Q8WVZ9 684 aa22.96■■□□□ 1.27
UPF3A-201ENST00000351487 APBB2Q92870 758 aa22.96■■□□□ 1.27
UPF3A-201ENST00000351487 MAML3Q96JK9 1138 aa22.96■■□□□ 1.27
UPF3A-201ENST00000351487 EBF2Q9HAK2 575 aa22.96■■□□□ 1.27
UPF3A-201ENST00000351487 WFS1O76024 890 aa22.95■■□□□ 1.26
UPF3A-201ENST00000351487 RECQL4O94761 1208 aa22.95■■□□□ 1.26
UPF3A-201ENST00000351487 MAP3K6O95382 1288 aa22.95■■□□□ 1.26
UPF3A-201ENST00000351487 T-ENOLP0DO92 83 aa22.95■■□□□ 1.26
UPF3A-201ENST00000351487 TPSB2P20231 275 aa22.95■■□□□ 1.26
UPF3A-201ENST00000351487 GRB14Q14449 540 aa22.95■■□□□ 1.26
UPF3A-201ENST00000351487 TPSAB1Q15661 275 aa22.95■■□□□ 1.26
UPF3A-201ENST00000351487 VPS52Q8N1B4 723 aa22.95■■□□□ 1.26
UPF3A-201ENST00000351487 TBC1D31Q96DN5 1066 aa22.95■■□□□ 1.26
UPF3A-201ENST00000351487 ABHD16BQ9H3Z7 469 aa22.95■■□□□ 1.26
UPF3A-201ENST00000351487 MTMR10Q9NXD2 777 aa22.95■■□□□ 1.26
UPF3A-201ENST00000351487 MCM8Q9UJA3 840 aa22.95■■□□□ 1.26
UPF3A-201ENST00000351487 GJD2Q9UKL4 321 aa22.95■■□□□ 1.26
UPF3A-201ENST00000351487 HES2Q9Y543 173 aa22.95■■□□□ 1.26
UPF3A-201ENST00000351487 SLC15A5A6NIM6 579 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 A6NJR5 290 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 A8MUI8 341 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 TRAFD1O14545 582 aaPredicted RBP22.94■■□□□ 1.26
UPF3A-201ENST00000351487 PYGBP11216 843 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 CCND1P24385 295 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 GLRA4Q5JXX5 417 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 ZNF534Q76KX8 674 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 CLEC4CQ8WTT0 213 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 QKIQ96PU8 341 aaKnown RBP eCLIP22.94■■□□□ 1.26
UPF3A-201ENST00000351487 TSSK1BQ9BXA7 367 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 KANSL3Q9P2N6 904 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 AP4E1Q9UPM8 1137 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 GINS2Q9Y248 185 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 PIRO00625 290 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 KRT37O76014 449 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 TGDSO95455 350 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 SNRPAP09012 282 aaKnown RBP22.94■■□□□ 1.26
UPF3A-201ENST00000351487 GBE1Q04446 702 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 TMEM62Q0P6H9 643 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 FBXO47Q5MNV8 452 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 C9orf131Q5VYM1 1079 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 RPAINQ86UA6 219 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 PPM1NQ8N819 430 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 SLC7A6OSQ96CW6 309 aaPredicted RBP22.94■■□□□ 1.26
UPF3A-201ENST00000351487 MS4A4AQ96JQ5 239 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 FAM111AQ96PZ2 611 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 TRIM55Q9BYV6 548 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 FAM49AQ9H0Q0 323 aaPredicted RBP22.94■■□□□ 1.26
UPF3A-201ENST00000351487 NXF3Q9H4D5 531 aaKnown RBP22.94■■□□□ 1.26
UPF3A-201ENST00000351487 DHX35Q9H5Z1 703 aaKnown RBP22.94■■□□□ 1.26
UPF3A-201ENST00000351487 HAO1Q9UJM8 370 aa22.94■■□□□ 1.26
UPF3A-201ENST00000351487 BTBD19C9JJ37 291 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 CAPN15O75808 1086 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 APOEP02649 317 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 CCDC130P13994 396 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 DARSP14868 501 aaKnown RBP22.93■■□□□ 1.26
UPF3A-201ENST00000351487 ACADSBP45954 432 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 RASSF2P50749 326 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 SLC10A2Q12908 348 aaPredicted RBP22.93■■□□□ 1.26
UPF3A-201ENST00000351487 PRKD1Q15139 912 aaPredicted RBP22.93■■□□□ 1.26
UPF3A-201ENST00000351487 FAM182AQ5T1J6 154 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 IQSEC1Q6DN90 963 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 GPR142Q7Z601 462 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 DPP9Q86TI2 863 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 LPIN3Q9BQK8 851 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 YY1AP1Q9H869 796 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 CDHR5Q9HBB8 845 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 SAR1AQ9NR31 198 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 MKS1Q9NXB0 559 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 GDAP2Q9NXN4 497 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 ZFP69BQ9UJL9 534 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.93■■□□□ 1.26
UPF3A-201ENST00000351487 DCAF8L1A6NGE4 600 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 CXorf49A8MYA2 514 aaPredicted RBP22.93■■□□□ 1.26
UPF3A-201ENST00000351487 TRIM49D1C9J1S8 452 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 KLF11O14901 512 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 HCRTO43612 131 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 METTL18O95568 372 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 CD4P01730 458 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 CCNFP41002 786 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 CTAGE3PQ8IX95 158 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 CSPG4P5Q96PW8 444 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 OSMRQ99650 979 aa22.93■■□□□ 1.26
UPF3A-201ENST00000351487 NRCAMQ92823 1304 aa22.92■■□□□ 1.26
UPF3A-201ENST00000351487 SMIM35A0A1B0GVV1 85 aa22.92■■□□□ 1.26
UPF3A-201ENST00000351487 MBLAC1A4D2B0 266 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms