RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 CCT8L1PA6NM43 557 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 TIMM44O43615 452 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 ZNF268Q14587 947 aaPredicted RBP19.18■□□□□ 0.66
UBE3C-201ENST00000348165 MRIQ9BWK5 157 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 SPATA16Q9BXB7 569 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 RNF112Q9ULX5 631 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 PCDHB12Q9Y5F1 795 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 RECQL4O94761 1208 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 DAB2P98082 770 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 TLR8Q9NR97 1041 aaKnown RBP19.18■□□□□ 0.66
UBE3C-201ENST00000348165 KDM1AO60341 852 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 PATL1Q86TB9 770 aaKnown RBP19.18■□□□□ 0.66
UBE3C-201ENST00000348165 ZNF410Q86VK4 478 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 RIOX2Q8IUF8 465 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 NEUROG2Q9H2A3 272 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 PSMD10O75832 226 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 BMPR2Q13873 1038 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 PORCNQ9H237 461 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 TRIM16O95361 564 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 PYGMP11217 842 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 AMPD1P23109 780 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 TRIP10Q15642 601 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 DEFB106AQ8N104 65 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 ADAM2Q99965 735 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 TINF2Q9BSI4 451 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 PIH1D1Q9NWS0 290 aaKnown RBP19.17■□□□□ 0.66
UBE3C-201ENST00000348165 PHTF1Q9UMS5 762 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 APOA4P06727 396 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 TPH1P17752 444 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 PPP3CAQ08209 521 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 DGKZQ13574 1117 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 MARC1Q5VT66 337 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 VPS37AQ8NEZ2 397 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 SEMA4AQ9H3S1 761 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 KCNMB3Q9NPA1 279 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 NUDT5Q9UKK9 219 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 ZSCAN5CA6NGD5 496 aaPredicted RBP19.17■□□□□ 0.66
UBE3C-201ENST00000348165 SOAT1P35610 550 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 NEK2P51955 445 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 DLG4P78352 724 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 DMC1Q14565 340 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 POU6F1Q14863 301 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 AARS2Q5JTZ9 985 aaKnown RBP19.17■□□□□ 0.66
UBE3C-201ENST00000348165 MFSD7Q6UXD7 560 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 PTAR1Q7Z6K3 402 aaPredicted RBP19.17■□□□□ 0.66
UBE3C-201ENST00000348165 ZBTB10Q96DT7 871 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 UBE2OQ9C0C9 1292 aaKnown RBP19.17■□□□□ 0.66
UBE3C-201ENST00000348165 RNF208Q9H0X6 261 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 HMX1Q9NP08 348 aaPredicted RBP19.17■□□□□ 0.66
UBE3C-201ENST00000348165 HPS4Q9NQG7 708 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 GID8Q9NWU2 228 aa19.17■□□□□ 0.66
UBE3C-201ENST00000348165 FLOT2Q14254 428 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 NSL1Q96IY1 281 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 C17orf80Q9BSJ5 609 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 CLPBQ9H078 707 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 TMEM39AQ9NV64 488 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 L1RE1Q9UN81 338 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 NFASCO94856 1347 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 KCNK1O00180 336 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 O00370 1275 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 TSPAN3O60637 253 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 TM4SF1P30408 202 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 TBX4P57082 545 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 EFL1Q7Z2Z2 1120 aaKnown RBP19.16■□□□□ 0.66
UBE3C-201ENST00000348165 GALNT4Q8N4A0 578 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 WDR18Q9BV38 432 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 ACP6Q9NPH0 428 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 PDGFCQ9NRA1 345 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 DCDC2Q9UHG0 476 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 SNCAIPQ9Y6H5 919 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 PPIL2Q13356 520 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 MPP3Q13368 585 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 WDR59Q6PJI9 974 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 SLC26A11Q86WA9 606 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 KIAA2013Q8IYS2 634 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 HES2Q9Y543 173 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 DDHD2O94830 711 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 HLA-DPA1P20036 260 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 SERPINB8P50452 374 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 MRPS35P82673 323 aaKnown RBP19.16■□□□□ 0.66
UBE3C-201ENST00000348165 TMEM154Q6P9G4 183 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 UNKQ9C0B0 810 aaKnown RBP19.16■□□□□ 0.66
UBE3C-201ENST00000348165 PDGFDQ9GZP0 370 aaPredicted RBP19.16■□□□□ 0.66
UBE3C-201ENST00000348165 UTP6Q9NYH9 597 aaKnown RBP19.16■□□□□ 0.66
UBE3C-201ENST00000348165 HEY2Q9UBP5 337 aa19.16■□□□□ 0.66
UBE3C-201ENST00000348165 PJA2O43164 708 aa19.15■□□□□ 0.66
UBE3C-201ENST00000348165 ITGALP20701 1170 aa19.15■□□□□ 0.66
UBE3C-201ENST00000348165 CCND1P24385 295 aa19.15■□□□□ 0.66
UBE3C-201ENST00000348165 TMED10P49755 219 aaKnown RBP19.15■□□□□ 0.66
UBE3C-201ENST00000348165 WASHC5Q12768 1159 aa19.15■□□□□ 0.66
UBE3C-201ENST00000348165 HIST2H2ACQ16777 129 aaPredicted RBP19.15■□□□□ 0.66
UBE3C-201ENST00000348165 HIST2H2AA3Q6FI13 130 aa19.15■□□□□ 0.66
UBE3C-201ENST00000348165 ARMC6Q6NXE6 501 aa19.15■□□□□ 0.66
UBE3C-201ENST00000348165 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.15■□□□□ 0.66
UBE3C-201ENST00000348165 CATSPER1Q8NEC5 780 aa19.15■□□□□ 0.66
UBE3C-201ENST00000348165 FAM162AQ96A26 154 aa19.15■□□□□ 0.66
UBE3C-201ENST00000348165 FBXO44Q9H4M3 255 aa19.15■□□□□ 0.66
UBE3C-201ENST00000348165 TSC22D4Q9Y3Q8 395 aa19.15■□□□□ 0.66
UBE3C-201ENST00000348165 TRPC5OSA6NMA1 111 aa19.15■□□□□ 0.66
UBE3C-201ENST00000348165 EVPLLA8MZ36 301 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms