RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 RSL24D1Q9UHA3 163 aaKnown RBP15.97■□□□□ 0.15
SRPK1-201ENST00000346162 TISP43B9A030 160 aa15.97■□□□□ 0.15
SRPK1-201ENST00000346162 BNIP3LO60238 219 aa15.97■□□□□ 0.15
SRPK1-201ENST00000346162 TM4SF1P30408 202 aa15.97■□□□□ 0.15
SRPK1-201ENST00000346162 GCNT1Q02742 428 aa15.97■□□□□ 0.15
SRPK1-201ENST00000346162 MCOLN2Q8IZK6 566 aa15.97■□□□□ 0.15
SRPK1-201ENST00000346162 GTF3C2Q8WUA4 911 aaPredicted RBP15.97■□□□□ 0.15
SRPK1-201ENST00000346162 DFFAO00273 331 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 TAF1CQ15572 869 aaPredicted RBP15.96■□□□□ 0.15
SRPK1-201ENST00000346162 AFG1LQ8WV93 481 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 ELMO3Q96BJ8 720 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 DNAJC1Q96KC8 554 aaKnown RBP15.96■□□□□ 0.15
SRPK1-201ENST00000346162 KNDC1Q76NI1 1749 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 PEX1O43933 1283 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 CNOT3O75175 753 aaKnown RBP15.96■□□□□ 0.15
SRPK1-201ENST00000346162 TRMUO75648 421 aaKnown RBP15.96■□□□□ 0.15
SRPK1-201ENST00000346162 BGNP21810 368 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 CCNG2Q16589 344 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 CRY2Q49AN0 593 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 FASTKD1Q53R41 847 aaKnown RBP15.96■□□□□ 0.15
SRPK1-201ENST00000346162 PERM1Q5SV97 790 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 MFSD14CQ5VZR4 134 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 ZBTB46Q86UZ6 589 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 EXOC3L1Q86VI1 746 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 CCL15-CCL14A0A0B4J2E2 113 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 KDM4FA0A1W2PPD8 638 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 C3orf70A6NLC5 250 aaPredicted RBP15.96■□□□□ 0.15
SRPK1-201ENST00000346162 NFKBIAP25963 317 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 HNRNPH3P31942 346 aaKnown RBP15.96■□□□□ 0.15
SRPK1-201ENST00000346162 GNL1P36915 607 aaPredicted RBP15.96■□□□□ 0.15
SRPK1-201ENST00000346162 MAPK10P53779 464 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 CCL15Q16663 113 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 DGKDQ16760 1214 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 NOTUMQ6P988 496 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 METTL7BQ6UX53 244 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 ERO1BQ86YB8 467 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 TSPAN14Q8NG11 270 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 PDCD6IPQ8WUM4 868 aaKnown RBP15.96■□□□□ 0.15
SRPK1-201ENST00000346162 PLEKHG4BQ96PX9 1271 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 SPON2Q9BUD6 331 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 SP110Q9HB58 689 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 DPP3Q9NY33 737 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 USP20Q9Y2K6 914 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 FMN2Q9NZ56 1722 aa15.96■□□□□ 0.15
SRPK1-201ENST00000346162 RRN3P2A6NIE6 340 aa15.96■□□□□ 0.14
SRPK1-201ENST00000346162 PIK3CDO00329 1044 aa15.96■□□□□ 0.14
SRPK1-201ENST00000346162 RIPOR1Q6ZS17 1223 aa15.96■□□□□ 0.14
SRPK1-201ENST00000346162 IFNEQ86WN2 208 aa15.96■□□□□ 0.14
SRPK1-201ENST00000346162 WDR49Q8IV35 697 aa15.96■□□□□ 0.14
SRPK1-201ENST00000346162 ST13P5Q8NFI4 369 aaPredicted RBP15.96■□□□□ 0.14
SRPK1-201ENST00000346162 SYT15Q9BQS2 421 aa15.96■□□□□ 0.14
SRPK1-201ENST00000346162 SLCO1B3Q9NPD5 702 aa15.96■□□□□ 0.14
SRPK1-201ENST00000346162 ETNK2Q9NVF9 386 aa15.96■□□□□ 0.14
SRPK1-201ENST00000346162 DMTF1Q9Y222 760 aa15.96■□□□□ 0.14
SRPK1-201ENST00000346162 TBKBP1A7MCY6 615 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 TRIM49D1C9J1S8 452 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 LINGO3P0C6S8 592 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 RTP1P59025 263 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 PPP3CAQ08209 521 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 RNF135Q8IUD6 432 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 POU5F2Q8N7G0 328 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 DNERQ8NFT8 737 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 URGCPQ8TCY9 931 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 DEPDC7Q96QD5 511 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 PARK7Q99497 189 aaKnown RBP15.95■□□□□ 0.14
SRPK1-201ENST00000346162 TRIM39Q9HCM9 518 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 ALBP02768 609 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 NUDT17P0C025 328 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 HSPA1AP0DMV8 641 aaKnown RBP15.95■□□□□ 0.14
SRPK1-201ENST00000346162 HSPA1BP0DMV9 641 aaKnown RBP15.95■□□□□ 0.14
SRPK1-201ENST00000346162 VDRP11473 427 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 JAK1P23458 1154 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 GLRA4Q5JXX5 417 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 DHDDSQ86SQ9 333 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 MAP4K3Q8IVH8 894 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 FBXO16Q8IX29 292 aaPredicted RBP15.95■□□□□ 0.14
SRPK1-201ENST00000346162 ZNF606Q8WXB4 792 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 WDR18Q9BV38 432 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 FRMD8Q9BZ67 464 aaPredicted RBP15.95■□□□□ 0.14
SRPK1-201ENST00000346162 GANQ9H2C0 597 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 CDY2AQ9Y6F7 541 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 CDY1Q9Y6F8 540 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 A0A087WXM4 84 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 MEI4A8MW99 385 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 WBP4O75554 376 aaKnown RBP15.95■□□□□ 0.14
SRPK1-201ENST00000346162 CDK16Q00536 496 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 PDK1Q15118 436 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 COBLL1Q53SF7 1204 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 FAXCQ5TGI0 409 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 NOP9Q86U38 636 aaKnown RBP15.95■□□□□ 0.14
SRPK1-201ENST00000346162 SH3TC2Q8TF17 1288 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 PTPRN2Q92932 1015 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 KAT5Q92993 513 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 COX4I2Q96KJ9 171 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 ASTN1O14525 1302 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 EEF2KO00418 725 aaKnown RBP15.95■□□□□ 0.14
SRPK1-201ENST00000346162 LSM8O95777 96 aaKnown RBP15.95■□□□□ 0.14
SRPK1-201ENST00000346162 CYP2B6P20813 491 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 TGFB2P61812 414 aa15.95■□□□□ 0.14
SRPK1-201ENST00000346162 YWHAHQ04917 246 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms