RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ARHGAP26Q9UNA1 814 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 SORCS3Q9UPU3 1222 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 GREB1Q4ZG55 1949 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 ZNF638Q14966 1978 aaKnown RBP12.39□□□□□ -0.43
SNCA-202ENST00000345009 CUL9Q8IWT3 2517 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 YJEFN3A6XGL0 299 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 HEPACAM2A8MVW5 462 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 E7ENQ6 273 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 SLC9A3R1O14745 358 aaPredicted RBP12.39□□□□□ -0.43
SNCA-202ENST00000345009 COCHO43405 550 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 HSF2BPO75031 334 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 OLFM2O95897 454 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 GZMAP12544 262 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 SKILP12757 684 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 UNGP13051 313 aaPredicted RBP12.39□□□□□ -0.43
SNCA-202ENST00000345009 ALADP13716 330 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 CHRNB2P17787 502 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 MMP8P22894 467 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 SCNN1AP37088 669 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 VIPR2P41587 438 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 GABRB2P47870 512 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 NOMO3P69849 1222 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 PFKPQ01813 784 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 SLC6A3Q01959 620 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 CLEC16AQ2KHT3 1053 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 SCD5Q86SK9 330 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 GPIHBP1Q8IV16 184 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 SLC44A3Q8N4M1 653 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 BPIFB1Q8TDL5 484 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 ANP32BQ92688 251 aaKnown RBP12.39□□□□□ -0.43
SNCA-202ENST00000345009 FGF14Q92915 247 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 IRF7Q92985 503 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 USP13Q92995 863 aaPredicted RBP12.39□□□□□ -0.43
SNCA-202ENST00000345009 VCPIP1Q96JH7 1222 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 ZFRQ96KR1 1074 aaKnown RBP12.39□□□□□ -0.43
SNCA-202ENST00000345009 DNAJC7Q99615 494 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 KXD1Q9BQD3 176 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 RNF38Q9H0F5 515 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 DEF6Q9H4E7 631 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 CCSER2Q9H7U1 834 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 NMUR1Q9HB89 426 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 POPDC2Q9HBU9 364 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 ADAM22Q9P0K1 906 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 MARCH2Q9P0N8 246 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 CYTH4Q9UIA0 394 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 CPQQ9Y646 472 aa12.39□□□□□ -0.43
SNCA-202ENST00000345009 ANKRD62A6NC57 917 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 ZNF263O14978 683 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 PAPSS1O43252 624 aaPredicted RBP12.38□□□□□ -0.43
SNCA-202ENST00000345009 AP5Z1O43299 807 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 MFAP3LO75121 409 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 ADCY5O95622 1261 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 ASGR2P07307 311 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 NCAM1P13591 858 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 TCF3P15923 654 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 DESP17661 470 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 CDC25BP30305 580 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 CENPCQ03188 943 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 EFEMP1Q12805 493 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 TBX2Q13207 712 aaPredicted RBP12.38□□□□□ -0.43
SNCA-202ENST00000345009 PTPN20Q4JDL3 420 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 ARHGAP29Q52LW3 1261 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 ACAD10Q6JQN1 1059 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 NUDT18Q6ZVK8 323 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 ZNF571Q7Z3V5 609 aaPredicted RBP12.38□□□□□ -0.43
SNCA-202ENST00000345009 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.38□□□□□ -0.43
SNCA-202ENST00000345009 PHF13Q86YI8 300 aaPredicted RBP12.38□□□□□ -0.43
SNCA-202ENST00000345009 TTC16Q8NEE8 873 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 SH3RF2Q8TEC5 729 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 NDRG1Q92597 394 aaKnown RBP12.38□□□□□ -0.43
SNCA-202ENST00000345009 TRIM11Q96F44 468 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 CCDC42Q96M95 316 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 NECAB3Q96P71 396 aaPredicted RBP12.38□□□□□ -0.43
SNCA-202ENST00000345009 SLC22A12Q96S37 553 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 DCLK3Q9C098 648 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 BRD9Q9H8M2 597 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 ABHD10Q9NUJ1 306 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 SMPD4Q9NXE4 827 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 RRN3Q9NYV6 651 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 TBC1D14Q9P2M4 693 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 IMPACTQ9P2X3 320 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 LSM7Q9UK45 103 aaKnown RBP12.38□□□□□ -0.43
SNCA-202ENST00000345009 SH3BP1Q9Y3L3 701 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 VCANP13611 3396 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 DENND4AQ7Z401 1863 aa12.38□□□□□ -0.43
SNCA-202ENST00000345009 E2F8A0AVK6 867 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 NRG2O14511 850 aaPredicted RBP12.37□□□□□ -0.43
SNCA-202ENST00000345009 CHADO15335 359 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 AKR1B10O60218 316 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 PRAMEF12O95522 483 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 TBX18O95935 607 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 ERBB2P04626 1255 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 SRFP11831 508 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 GBP1P32455 592 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 ADKP55263 362 aaKnown RBP12.37□□□□□ -0.43
SNCA-202ENST00000345009 CDK17Q00537 523 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 FCHO2Q0JRZ9 810 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 ARID5BQ14865 1188 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 PDGFRLQ15198 375 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 FAM102AQ5T9C2 384 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms