RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 PLA2G5P39877 138 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 NHLH1Q02575 133 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 GFPT1Q06210 699 aaPredicted RBP14.49□□□□□ -0.09
TPM4-202ENST00000344824 PON2Q15165 354 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 ITPRIPL2Q3MIP1 535 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 HS1BP3Q53T59 392 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 VPS36Q86VN1 386 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 PASD1Q8IV76 773 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 ACRBPQ8NEB7 543 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 SPDYE1Q8NFV5 336 aaPredicted RBP14.49□□□□□ -0.09
TPM4-202ENST00000344824 OVCA2Q8WZ82 227 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 DDX23Q9BUQ8 820 aaKnown RBP14.49□□□□□ -0.09
TPM4-202ENST00000344824 C8orf33Q9H7E9 229 aaPredicted RBP14.49□□□□□ -0.09
TPM4-202ENST00000344824 TRPV5Q9NQA5 729 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 TLR8Q9NR97 1041 aaKnown RBP14.49□□□□□ -0.09
TPM4-202ENST00000344824 SPATA6Q9NWH7 488 aaPredicted RBP14.49□□□□□ -0.09
TPM4-202ENST00000344824 ADAMTS1Q9UHI8 967 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 ARHGAP26Q9UNA1 814 aa14.49□□□□□ -0.09
TPM4-202ENST00000344824 KIAA1549LQ6ZVL6 1849 aa14.48□□□□□ -0.09
TPM4-202ENST00000344824 TMCO5BA8MYB1 307 aa14.48□□□□□ -0.09
TPM4-202ENST00000344824 NDUFA10O95299 355 aa14.48□□□□□ -0.09
TPM4-202ENST00000344824 PAEPP09466 180 aa14.48□□□□□ -0.09
TPM4-202ENST00000344824 CHRNB2P17787 502 aa14.48□□□□□ -0.09
TPM4-202ENST00000344824 CTHP32929 405 aa14.48□□□□□ -0.09
TPM4-202ENST00000344824 BCAT1P54687 386 aa14.48□□□□□ -0.09
TPM4-202ENST00000344824 FMO1Q01740 532 aa14.48□□□□□ -0.09
TPM4-202ENST00000344824 RUNX3Q13761 415 aa14.48□□□□□ -0.09
TPM4-202ENST00000344824 ANGPT1Q15389 498 aa14.48□□□□□ -0.09
TPM4-202ENST00000344824 HECTD3Q5T447 861 aa14.48□□□□□ -0.09
TPM4-202ENST00000344824 TXNDC11Q6PKC3 985 aa14.48□□□□□ -0.09
TPM4-202ENST00000344824 DNAAF5Q86Y56 855 aa14.48□□□□□ -0.09
TPM4-202ENST00000344824 CCDC170Q8IYT3 715 aa14.48□□□□□ -0.09
TPM4-202ENST00000344824 CPA6Q8N4T0 437 aa14.48□□□□□ -0.09
TPM4-202ENST00000344824 TFAP2BQ92481 460 aa14.48□□□□□ -0.09
TPM4-202ENST00000344824 RNF38Q9H0F5 515 aa14.48□□□□□ -0.09
TPM4-202ENST00000344824 FAM124BQ9H5Z6 455 aaPredicted RBP14.48□□□□□ -0.09
TPM4-202ENST00000344824 HPS4Q9NQG7 708 aa14.48□□□□□ -0.09
TPM4-202ENST00000344824 CFAP97Q9P2B7 532 aa14.48□□□□□ -0.09
TPM4-202ENST00000344824 EPN1Q9Y6I3 576 aaPredicted RBP14.48□□□□□ -0.09
TPM4-202ENST00000344824 A0A087X0T9 212 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 HHLA1C9JL84 531 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 M0QYV0 167 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 DDX3XO00571 662 aaKnown RBP eCLIP14.47□□□□□ -0.093e-12■■■■□ 25.2
TPM4-202ENST00000344824 COCHO43405 550 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 TLR5O60602 858 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 FAM228BP0C875 321 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 VDRP11473 427 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 PFKLP17858 780 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 NUBP1P53384 320 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 SLC7A9P82251 487 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 CDR2Q01850 454 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 PDGFRLQ15198 375 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 ARHGAP17Q68EM7 881 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 TTC30AQ86WT1 665 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 C17orf53Q8N3J3 647 aaPredicted RBP14.47□□□□□ -0.09
TPM4-202ENST00000344824 UBA3Q8TBC4 463 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 OSCP1Q8WVF1 389 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 ZNF606Q8WXB4 792 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 DDX1Q92499 740 aaKnown RBP14.47□□□□□ -0.09
TPM4-202ENST00000344824 ATP2A3Q93084 1043 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 MSANTD3Q96H12 275 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 ZSWIM1Q9BR11 485 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 PNPLA8Q9NP80 782 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 RBM12Q9NTZ6 932 aaKnown RBP14.47□□□□□ -0.09
TPM4-202ENST00000344824 COMMD8Q9NX08 183 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 NAGPAQ9UK23 515 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 NUDT5Q9UKK9 219 aa14.47□□□□□ -0.09
TPM4-202ENST00000344824 A0A1W2PQH9 124 aa14.46□□□□□ -0.09
TPM4-202ENST00000344824 SHISA7A6NL88 538 aa14.46□□□□□ -0.09
TPM4-202ENST00000344824 TULP2O00295 520 aa14.46□□□□□ -0.09
TPM4-202ENST00000344824 MDM4O15151 490 aa14.46□□□□□ -0.09
TPM4-202ENST00000344824 IPO7O95373 1038 aaKnown RBP14.46□□□□□ -0.09
TPM4-202ENST00000344824 PDE4CQ08493 712 aa14.46□□□□□ -0.09
TPM4-202ENST00000344824 BST2Q10589 180 aaKnown RBP14.46□□□□□ -0.09
TPM4-202ENST00000344824 SPA17Q15506 151 aa14.46□□□□□ -0.09
TPM4-202ENST00000344824 ASTE1Q2TB18 679 aaPredicted RBP14.46□□□□□ -0.09
TPM4-202ENST00000344824 CCDC122Q5T0U0 273 aa14.46□□□□□ -0.09
TPM4-202ENST00000344824 PIGZQ86VD9 579 aa14.46□□□□□ -0.09
TPM4-202ENST00000344824 RALGPS2Q86X27 583 aaPredicted RBP14.46□□□□□ -0.09
TPM4-202ENST00000344824 DDX42Q86XP3 938 aaKnown RBP eCLIP14.46□□□□□ -0.099e-6■□□□□ 9.6
TPM4-202ENST00000344824 ANKRD52Q8NB46 1076 aa14.46□□□□□ -0.09
TPM4-202ENST00000344824 OLIG1Q8TAK6 271 aa14.46□□□□□ -0.09
TPM4-202ENST00000344824 PCDHB18PQ96TA0 734 aa14.46□□□□□ -0.09
TPM4-202ENST00000344824 NELL2Q99435 816 aa14.46□□□□□ -0.09
TPM4-202ENST00000344824 FAM83CQ9BQN1 747 aa14.46□□□□□ -0.09
TPM4-202ENST00000344824 SYT11Q9BT88 431 aa14.46□□□□□ -0.09
TPM4-202ENST00000344824 LMAN1LQ9HAT1 526 aa14.46□□□□□ -0.09
TPM4-202ENST00000344824 DLGAP2Q9P1A6 1054 aa14.46□□□□□ -0.09
TPM4-202ENST00000344824 ZKSCAN5Q9Y2L8 839 aa14.46□□□□□ -0.09
TPM4-202ENST00000344824 SH3BP1Q9Y3L3 701 aa14.46□□□□□ -0.09
TPM4-202ENST00000344824 ARIH1Q9Y4X5 557 aaPredicted RBP14.46□□□□□ -0.09
TPM4-202ENST00000344824 FANCMQ8IYD8 2048 aa14.46□□□□□ -0.1
TPM4-202ENST00000344824 EIF3CLB5ME19 914 aaKnown RBP14.45□□□□□ -0.1
TPM4-202ENST00000344824 LAMTOR5O43504 91 aa14.45□□□□□ -0.1
TPM4-202ENST00000344824 MED7O43513 233 aa14.45□□□□□ -0.1
TPM4-202ENST00000344824 NFATC1O95644 943 aa14.45□□□□□ -0.1
TPM4-202ENST00000344824 OLFM2O95897 454 aa14.45□□□□□ -0.1
TPM4-202ENST00000344824 RARGP13631 454 aa14.45□□□□□ -0.1
TPM4-202ENST00000344824 PGFP49763 221 aa14.45□□□□□ -0.1
TPM4-202ENST00000344824 RGS7P49802 495 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms