RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 SPDYE2Q495Y8 402 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 PTAR1Q7Z6K3 402 aaPredicted RBP12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 CCNJLQ8IV13 435 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 BRSK2Q8IWQ3 736 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 DIS3LQ8TF46 1054 aaKnown RBP12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 GDPD5Q8WTR4 605 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 CPXM1Q96SM3 734 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 HERPUD2Q9BSE4 406 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 ATXN3LQ9H3M9 355 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 PTPRHQ9HD43 1115 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 AK5Q9Y6K8 562 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 TBC1D12O60347 775 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 GSCP56915 257 aaPredicted RBP12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 MRPS22P82650 360 aaKnown RBP12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 POU5F1Q01860 360 aaKnown RBP12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 EEF1DP3Q658K8 133 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 KLC3Q6P597 504 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 MON1BQ7L1V2 547 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 ZNF516Q92618 1163 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 SLC10A4Q96EP9 437 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 CATSPER2Q96P56 530 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 TMEM109Q9BVC6 243 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 IARS2Q9NSE4 1012 aaKnown RBP12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 GOLGA8CPA6NN73 597 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 GJC2Q5T442 439 aaPredicted RBP12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 FAM228AQ86W67 206 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 RBM15BQ8NDT2 890 aaKnown RBP12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 MBOAT7Q96N66 472 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 MMP19Q99542 508 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 CADM1Q9BY67 442 aaKnown RBP12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 FAM96AQ9H5X1 160 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 THEGQ9P2T0 379 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 SNX13Q9Y5W8 968 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 CDY2AQ9Y6F7 541 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 CDY1Q9Y6F8 540 aa12.83□□□□□ -0.36
SNRNP48-201ENST00000342415 SCN11AQ9UI33 1791 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 TCRBV7S3A2A0A539 114 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 UBA6A0AVT1 1052 aaPredicted RBP12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 LACTBL1A8MY62 500 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 NFICP08651 508 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 TPBGLP0DKB5 382 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 MCF2P10911 925 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 SH3BGRP55822 239 aaPredicted RBP12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 USP4Q13107 963 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 CAPSQ13938 189 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 PAN2Q504Q3 1202 aaKnown RBP12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 LPCAT4Q643R3 524 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 COPS5Q92905 334 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 ELMO2Q96JJ3 720 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 CCT7Q99832 543 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 GPR88Q9GZN0 384 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 CCDC90BQ9GZT6 254 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 ILKAPQ9H0C8 392 aaPredicted RBP12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 LZTS1Q9Y250 596 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 HES2Q9Y543 173 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 SPDYE5A6NIY4 337 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 GLRA3O75311 464 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 LRCH4O75427 683 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 F7P08709 466 aaPredicted RBP12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 VDRP11473 427 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 NCAM1P13591 858 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 EIF4BP23588 611 aaKnown RBP12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 ACAT1P24752 427 aaKnown RBP12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 IREB2P48200 963 aaKnown RBP12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 PLK1P53350 603 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 LAMB3Q13751 1172 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 SH3PXD2AQ5TCZ1 1133 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 IRGCQ6NXR0 463 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 RINLQ6ZS11 566 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 RNF139Q8WU17 664 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 TFAP2BQ92481 460 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 CELF6Q96J87 481 aaKnown RBP12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 MRPL1Q9BYD6 325 aaKnown RBP12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 B3GNT5Q9BYG0 378 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 SMARCAD1Q9H4L7 1026 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 HSPA8P11142 646 aaKnown RBP12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 NELFEP18615 380 aaKnown RBP12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 FSTL1Q12841 308 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 VWA5B1Q5TIE3 1220 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 CMC1Q7Z7K0 106 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 ZBTB46Q86UZ6 589 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 PHF13Q86YI8 300 aaPredicted RBP12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 SAMD3Q8N6K7 520 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 CDRT15Q96T59 188 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 PORCNQ9H237 461 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 ADAM7Q9H2U9 754 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 TAS2R1Q9NYW7 299 aa12.82□□□□□ -0.36
SNRNP48-201ENST00000342415 CLPTM1O96005 669 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 JCHAINP01591 159 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 ITGAVP06756 1048 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 UNGP13051 313 aaPredicted RBP12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 WLSQ5T9L3 541 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 PLEKHA7Q6IQ23 1121 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 RAB44Q7Z6P3 723 aaPredicted RBP12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 LGMNQ99538 433 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 KLHL4Q9C0H6 718 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 THAP1Q9NVV9 213 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 CORO1CQ9ULV4 474 aaPredicted RBP12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 DRG1Q9Y295 367 aaKnown RBP12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 MYPNQ86TC9 1320 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms