RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 NPY5RQ15761 445 aa19.94■□□□□ 0.78
CDK13-202ENST00000340829 C15orf59Q2T9L4 293 aaPredicted RBP19.94■□□□□ 0.78
CDK13-202ENST00000340829 AGAP9Q5VTM2 703 aa19.94■□□□□ 0.78
CDK13-202ENST00000340829 UNC45BQ8IWX7 931 aa19.94■□□□□ 0.78
CDK13-202ENST00000340829 ZCCHC9Q8N567 271 aaKnown RBP19.94■□□□□ 0.78
CDK13-202ENST00000340829 EIF1ADQ8N9N8 165 aaKnown RBP19.94■□□□□ 0.78
CDK13-202ENST00000340829 KAT2BQ92831 832 aa19.94■□□□□ 0.78
CDK13-202ENST00000340829 ABHD16BQ9H3Z7 469 aa19.94■□□□□ 0.78
CDK13-202ENST00000340829 RXFP1Q9HBX9 757 aa19.94■□□□□ 0.78
CDK13-202ENST00000340829 AFDNP55196 1824 aaKnown RBP19.94■□□□□ 0.78
CDK13-202ENST00000340829 KCNK1O00180 336 aa19.94■□□□□ 0.78
CDK13-202ENST00000340829 NCKAP1LP55160 1127 aa19.94■□□□□ 0.78
CDK13-202ENST00000340829 MGAT5Q09328 741 aa19.94■□□□□ 0.78
CDK13-202ENST00000340829 RASA2Q15283 850 aa19.94■□□□□ 0.78
CDK13-202ENST00000340829 CELF3Q5SZQ8 465 aaKnown RBP19.94■□□□□ 0.78
CDK13-202ENST00000340829 SUGP1Q8IWZ8 645 aaKnown RBP19.94■□□□□ 0.78
CDK13-202ENST00000340829 TEX9Q8N6V9 391 aa19.94■□□□□ 0.78
CDK13-202ENST00000340829 HTR3CQ8WXA8 447 aa19.94■□□□□ 0.78
CDK13-202ENST00000340829 VANGL2Q9ULK5 521 aa19.94■□□□□ 0.78
CDK13-202ENST00000340829 ARHGAP26Q9UNA1 814 aa19.94■□□□□ 0.78
CDK13-202ENST00000340829 CNTNAP2Q9UHC6 1331 aa19.93■□□□□ 0.78
CDK13-202ENST00000340829 WDR27A2RRH5 827 aa19.93■□□□□ 0.78
CDK13-202ENST00000340829 TPH1P17752 444 aa19.93■□□□□ 0.78
CDK13-202ENST00000340829 TTC30AQ86WT1 665 aa19.93■□□□□ 0.78
CDK13-202ENST00000340829 HSD3B7Q9H2F3 369 aa19.93■□□□□ 0.78
CDK13-202ENST00000340829 RUBCNLQ9H714 662 aa19.93■□□□□ 0.78
CDK13-202ENST00000340829 SH3BP1Q9Y3L3 701 aa19.93■□□□□ 0.78
CDK13-202ENST00000340829 ALDH1A1P00352 501 aa19.93■□□□□ 0.78
CDK13-202ENST00000340829 RBL1P28749 1068 aa19.93■□□□□ 0.78
CDK13-202ENST00000340829 MROH7Q68CQ1 1323 aa19.93■□□□□ 0.78
CDK13-202ENST00000340829 UBTFL6P0CB48 400 aaPredicted RBP19.93■□□□□ 0.78
CDK13-202ENST00000340829 FLOT2Q14254 428 aa19.93■□□□□ 0.78
CDK13-202ENST00000340829 SGO1Q5FBB7 561 aa19.93■□□□□ 0.78
CDK13-202ENST00000340829 DDX53Q86TM3 631 aaKnown RBP19.93■□□□□ 0.78
CDK13-202ENST00000340829 UNKQ9C0B0 810 aaKnown RBP19.93■□□□□ 0.78
CDK13-202ENST00000340829 TRPC5OSA6NMA1 111 aa19.93■□□□□ 0.78
CDK13-202ENST00000340829 CPA3P15088 417 aa19.93■□□□□ 0.78
CDK13-202ENST00000340829 CTXN3Q4LDR2 81 aa19.93■□□□□ 0.78
CDK13-202ENST00000340829 KCNT2Q6UVM3 1135 aa19.93■□□□□ 0.78
CDK13-202ENST00000340829 TLK2Q86UE8 772 aa19.93■□□□□ 0.78
CDK13-202ENST00000340829 SPATA17Q96L03 361 aa19.93■□□□□ 0.78
CDK13-202ENST00000340829 COLEC11Q9BWP8 271 aa19.93■□□□□ 0.78
CDK13-202ENST00000340829 STX18Q9P2W9 335 aaKnown RBP19.93■□□□□ 0.78
CDK13-202ENST00000340829 PCYOX1Q9UHG3 505 aa19.93■□□□□ 0.78
CDK13-202ENST00000340829 PCDHGB4Q9UN71 923 aa19.93■□□□□ 0.78
CDK13-202ENST00000340829 MRPL42Q9Y6G3 142 aaKnown RBP19.93■□□□□ 0.78
CDK13-202ENST00000340829 VHLP40337 213 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 RGS4P49798 205 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 CSE1LP55060 971 aaKnown RBP19.92■□□□□ 0.78
CDK13-202ENST00000340829 MFSD10Q14728 455 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 ZACNQ401N2 412 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 HGSNATQ68CP4 663 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 TIGD7Q6NT04 549 aaPredicted RBP19.92■□□□□ 0.78
CDK13-202ENST00000340829 CES3Q6UWW8 571 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 YY1AP1Q9H869 796 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 DYRK4Q9NR20 520 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 ADAMTS3O15072 1205 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 CNTFP26441 200 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 SLC11A2P49281 568 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 ALDH7A1P49419 539 aaKnown RBP19.92■□□□□ 0.78
CDK13-202ENST00000340829 MRNIPQ6NTE8 343 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 KIAA0319LQ8IZA0 1049 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 ALG3Q92685 438 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 NFASCO94856 1347 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 ARHGAP10A1A4S6 786 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 F5H5T6 163 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 H0Y626 953 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 MGAT1P26572 445 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 RRP1BQ14684 758 aaKnown RBP19.92■□□□□ 0.78
CDK13-202ENST00000340829 SYTL3Q4VX76 610 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 ZDHHC17Q8IUH5 632 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 ATXN2LQ8WWM7 1075 aaKnown RBP19.92■□□□□ 0.78
CDK13-202ENST00000340829 NT5MQ9NPB1 228 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.92■□□□□ 0.78
CDK13-202ENST00000340829 RECQL4O94761 1208 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 MAP4P27816 1152 aaKnown RBP19.92■□□□□ 0.78
CDK13-202ENST00000340829 FAAP100Q0VG06 881 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 ZNF177Q13360 481 aaPredicted RBP19.92■□□□□ 0.78
CDK13-202ENST00000340829 DPYSL3Q14195 570 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 POU6F1Q14863 301 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 ZNF410Q86VK4 478 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 UBE2OQ9C0C9 1292 aaKnown RBP19.92■□□□□ 0.78
CDK13-202ENST00000340829 BATF3Q9NR55 127 aa19.92■□□□□ 0.78
CDK13-202ENST00000340829 NID2Q14112 1375 aa19.91■□□□□ 0.78
CDK13-202ENST00000340829 E9PBE3 544 aa19.91■□□□□ 0.78
CDK13-202ENST00000340829 KLHL41O60662 606 aa19.91■□□□□ 0.78
CDK13-202ENST00000340829 CACNA1FO60840 1977 aa19.91■□□□□ 0.78
CDK13-202ENST00000340829 SLC12A8A0AV02 714 aa19.91■□□□□ 0.78
CDK13-202ENST00000340829 MAFO75444 373 aaPredicted RBP19.91■□□□□ 0.78
CDK13-202ENST00000340829 NOL4O94818 638 aa19.91■□□□□ 0.78
CDK13-202ENST00000340829 RPL7AP62424 266 aaKnown RBP19.91■□□□□ 0.78
CDK13-202ENST00000340829 ACVR2BQ13705 512 aa19.91■□□□□ 0.78
CDK13-202ENST00000340829 LRRC23Q53EV4 343 aaPredicted RBP19.91■□□□□ 0.78
CDK13-202ENST00000340829 RNF168Q8IYW5 571 aaPredicted RBP19.91■□□□□ 0.78
CDK13-202ENST00000340829 SPATA31C2B4DYI2 1134 aa19.91■□□□□ 0.78
CDK13-202ENST00000340829 GJB1P08034 283 aa19.91■□□□□ 0.78
CDK13-202ENST00000340829 N4BP2L1Q5TBK1 243 aaPredicted RBP19.91■□□□□ 0.78
CDK13-202ENST00000340829 NPNTQ6UXI9 565 aa19.91■□□□□ 0.78
CDK13-202ENST00000340829 RBM22Q9NW64 420 aaKnown RBP eCLIP19.91■□□□□ 0.784e-8■□□□□ 10.4
CDK13-202ENST00000340829 ACOT9Q9Y305 439 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms