RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 MAN1A2O60476 641 aa9.61□□□□□ -0.87
RPGR-202ENST00000339363 ADRB2P07550 413 aa9.61□□□□□ -0.87
RPGR-202ENST00000339363 CDK9P50750 372 aaKnown RBP9.61□□□□□ -0.87
RPGR-202ENST00000339363 CD300CQ08708 224 aa9.61□□□□□ -0.87
RPGR-202ENST00000339363 DGKZQ13574 1117 aa9.61□□□□□ -0.87
RPGR-202ENST00000339363 PEX6Q13608 980 aa9.61□□□□□ -0.87
RPGR-202ENST00000339363 NIPAL1Q6NVV3 410 aa9.61□□□□□ -0.87
RPGR-202ENST00000339363 RHBDF2Q6PJF5 856 aa9.61□□□□□ -0.87
RPGR-202ENST00000339363 OTOP1Q7RTM1 612 aa9.61□□□□□ -0.87
RPGR-202ENST00000339363 AHI1Q8N157 1196 aa9.61□□□□□ -0.87
RPGR-202ENST00000339363 EPS8L1Q8TE68 723 aa9.61□□□□□ -0.87
RPGR-202ENST00000339363 PAFAH2Q99487 392 aa9.61□□□□□ -0.87
RPGR-202ENST00000339363 VPS11Q9H270 941 aa9.61□□□□□ -0.87
RPGR-202ENST00000339363 WARS2Q9UGM6 360 aaKnown RBP9.61□□□□□ -0.87
RPGR-202ENST00000339363 NRAPQ86VF7 1730 aa9.61□□□□□ -0.87
RPGR-202ENST00000339363 FAM47E-STBD1D6RA91 191 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 BUD23O43709 281 aaKnown RBP9.6□□□□□ -0.87
RPGR-202ENST00000339363 GRIN3BO60391 1043 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 DDX5P17844 614 aaKnown RBP9.6□□□□□ -0.87
RPGR-202ENST00000339363 RPS6P62753 249 aaKnown RBP9.6□□□□□ -0.87
RPGR-202ENST00000339363 FMO1Q01740 532 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 CCSAPQ6IQ19 270 aaPredicted RBP9.6□□□□□ -0.87
RPGR-202ENST00000339363 TTC33Q6PID6 262 aaPredicted RBP9.6□□□□□ -0.87
RPGR-202ENST00000339363 RHPN2Q8IUC4 686 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 PPM1KQ8N3J5 372 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 SAMD3Q8N6K7 520 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 SEMA6AQ9H2E6 1030 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 DMAC2Q9NW81 257 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 KDM3AQ9Y4C1 1321 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 SIPA1L1O43166 1804 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 KAT6AQ92794 2004 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 DNAJA2O60884 412 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 TSPAN9O75954 239 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 SORBS2O94875 1100 aaKnown RBP9.6□□□□□ -0.87
RPGR-202ENST00000339363 KRT5P13647 590 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 FGFR3P22607 806 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 MYL7Q01449 175 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 BFSP1Q12934 665 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 HNRNPDQ14103 355 aaKnown RBP9.6□□□□□ -0.87
RPGR-202ENST00000339363 TFDP1Q14186 410 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 ZNF829Q3KNS6 432 aaPredicted RBP9.6□□□□□ -0.87
RPGR-202ENST00000339363 PPP6R3Q5H9R7 873 aaPredicted RBP9.6□□□□□ -0.87
RPGR-202ENST00000339363 WDR45BQ5MNZ6 344 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 RTKN2Q8IZC4 609 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 SIX6OS1Q8N1H7 587 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 TMEM130Q8N3G9 435 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 KCNN1Q92952 543 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 ALKBH8Q96BT7 664 aaKnown RBP9.6□□□□□ -0.87
RPGR-202ENST00000339363 MECRQ9BV79 373 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 SENP6Q9GZR1 1112 aaPredicted RBP9.6□□□□□ -0.87
RPGR-202ENST00000339363 TXNDC16Q9P2K2 825 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 STRIP2Q9ULQ0 834 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 SSX2IPQ9Y2D8 614 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 AP4S1Q9Y587 144 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 STK24Q9Y6E0 443 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 WNK3Q9BYP7 1800 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 RPS6KA4O75676 772 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 BAIAP3O94812 1187 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 RALAP11233 206 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 RAB15P59190 212 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 GSTO1P78417 241 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 GRM2Q14416 872 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 EFTUD2Q15029 972 aaKnown RBP eCLIP9.6□□□□□ -0.87
RPGR-202ENST00000339363 KCNJ8Q15842 424 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 ANO4Q32M45 955 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 ODR4Q5SWX8 454 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 SYDE1Q6ZW31 735 aaPredicted RBP9.6□□□□□ -0.87
RPGR-202ENST00000339363 DENND1AQ8TEH3 1009 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 ITPKCQ96DU7 683 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 SIAEQ9HAT2 523 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 CEPT1Q9Y6K0 416 aa9.6□□□□□ -0.87
RPGR-202ENST00000339363 PLIN4Q96Q06 1357 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 TM9SF1O15321 606 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 DGKIO75912 1065 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 FAM13AO94988 1023 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 BMP3P12645 472 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 SERPINB1P30740 379 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 PSMC2P35998 433 aaKnown RBP9.59□□□□□ -0.87
RPGR-202ENST00000339363 EIF3EP60228 445 aaKnown RBP9.59□□□□□ -0.87
RPGR-202ENST00000339363 PTK7Q13308 1070 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 NEDD8Q15843 81 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 HIF1AQ16665 826 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 KLHL38Q2WGJ6 581 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 PPP4R3CPQ6ZMV5 832 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 FAM196AQ6ZSG2 479 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 ZCCHC23Q6ZST2 131 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 GCOM2Q9BZD3 368 aaPredicted RBP9.59□□□□□ -0.87
RPGR-202ENST00000339363 SNX25Q9H3E2 840 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 EBF1Q9UH73 591 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 POMPQ9Y244 141 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 MYH11P35749 1972 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 SPATA31A5Q5VU36 1347 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 SPATA31A7Q8IWB4 1347 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 RBBP6Q7Z6E9 1792 aaKnown RBP9.59□□□□□ -0.87
RPGR-202ENST00000339363 A0A1W2PPW3 197 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 PIK3CDO00329 1044 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 SORBS3O60504 671 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 GABBR2O75899 941 aa9.59□□□□□ -0.87
RPGR-202ENST00000339363 ENO3P13929 434 aaPredicted RBP9.59□□□□□ -0.87
RPGR-202ENST00000339363 CPA3P15088 417 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms