RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 CHPFQ8IZ52 775 aa3.05□□□□□ -1.92
XRCC4-202ENST00000338635 C11orf44Q8N8P7 122 aa3.05□□□□□ -1.92
XRCC4-202ENST00000338635 FAM71DQ8N9W8 422 aa3.05□□□□□ -1.92
XRCC4-202ENST00000338635 SLC44A5Q8NCS7 719 aa3.05□□□□□ -1.92
XRCC4-202ENST00000338635 WFIKKN2Q8TEU8 576 aa3.05□□□□□ -1.92
XRCC4-202ENST00000338635 MIB2Q96AX9 1013 aa3.05□□□□□ -1.92
XRCC4-202ENST00000338635 MED30Q96HR3 178 aa3.05□□□□□ -1.92
XRCC4-202ENST00000338635 FCRL5Q96RD9 977 aa3.05□□□□□ -1.92
XRCC4-202ENST00000338635 SMURF2Q9HAU4 748 aa3.05□□□□□ -1.92
XRCC4-202ENST00000338635 GJB4Q9NTQ9 266 aa3.05□□□□□ -1.92
XRCC4-202ENST00000338635 PCDHA7Q9UN72 937 aa3.05□□□□□ -1.92
XRCC4-202ENST00000338635 LUC7L2Q9Y383 392 aaKnown RBP3.05□□□□□ -1.92
XRCC4-202ENST00000338635 TRIP12Q14669 1992 aaPredicted RBP3.05□□□□□ -1.92
XRCC4-202ENST00000338635 SLC22A23A1A5C7 686 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 A8MVJ9 347 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 SPTLC2O15270 562 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 KITP10721 976 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 HOXA7P31268 230 aaPredicted RBP3.04□□□□□ -1.92
XRCC4-202ENST00000338635 MLH1P40692 756 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 PGDP52209 483 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 LTBQ06643 244 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 ATAT1Q5SQI0 421 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 METTL25Q8N6Q8 603 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 OIT3Q8WWZ8 545 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 PIGKQ92643 395 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 MSI2Q96DH6 328 aaKnown RBP3.04□□□□□ -1.92
XRCC4-202ENST00000338635 SLITRK1Q96PX8 696 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 PPP1R9BQ96SB3 815 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 ASPSCR1Q9BZE9 553 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 A1CFQ9NQ94 594 aaKnown RBP3.04□□□□□ -1.92
XRCC4-202ENST00000338635 SEMA5BQ9P283 1151 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 ERRFI1Q9UJM3 462 aaPredicted RBP3.04□□□□□ -1.92
XRCC4-202ENST00000338635 ANAPC4Q9UJX5 808 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 SPATA31A1Q5TZJ5 1347 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 TRBV5-3A0A0A0MS03 114 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 A0A1W2PPL8 197 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 F8W810 466 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 AGPSO00116 658 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 AKAP10O43572 662 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 UGDHO60701 494 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 PRAMEF2O60811 474 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 CAMTA2O94983 1202 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 VCAM1P19320 739 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 ADRA1DP25100 572 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 HOXA11P31270 313 aaPredicted RBP3.04□□□□□ -1.92
XRCC4-202ENST00000338635 ITGA8P53708 1063 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 SLC12A2P55011 1212 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 MTA1Q13330 715 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 KEAP1Q14145 624 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 ODF3L2Q3SX64 289 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 NUGGCQ68CJ6 796 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 TFAP2DQ7Z6R9 452 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 SPSB4Q96A44 273 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 WBP1Q96G27 269 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 VPS50Q96JG6 964 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 NT5C1BQ96P26 610 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 ZNF518BQ9C0D4 1074 aa3.04□□□□□ -1.92
XRCC4-202ENST00000338635 HEMK1Q9Y5R4 338 aaPredicted RBP3.04□□□□□ -1.92
XRCC4-202ENST00000338635 LOC102723971A0A1B0GUV8 181 aa3.03□□□□□ -1.92
XRCC4-202ENST00000338635 C16orf96A6NNT2 1141 aa3.03□□□□□ -1.92
XRCC4-202ENST00000338635 H7C4K7 107 aa3.03□□□□□ -1.92
XRCC4-202ENST00000338635 GRID2O43424 1007 aa3.03□□□□□ -1.92
XRCC4-202ENST00000338635 AP1G1O43747 822 aa3.03□□□□□ -1.92
XRCC4-202ENST00000338635 RRP9O43818 475 aaKnown RBP3.03□□□□□ -1.92
XRCC4-202ENST00000338635 PARP1P09874 1014 aaKnown RBP3.03□□□□□ -1.92
XRCC4-202ENST00000338635 RPS6KB1P23443 525 aa3.03□□□□□ -1.92
XRCC4-202ENST00000338635 HTR1BP28222 390 aa3.03□□□□□ -1.92
XRCC4-202ENST00000338635 PTDSS1P48651 473 aaKnown RBP3.03□□□□□ -1.92
XRCC4-202ENST00000338635 JAK3P52333 1124 aa3.03□□□□□ -1.92
XRCC4-202ENST00000338635 HILS1P60008 231 aa3.03□□□□□ -1.92
XRCC4-202ENST00000338635 TXNL4AP83876 142 aaKnown RBP3.03□□□□□ -1.92
XRCC4-202ENST00000338635 RPL36AP83881 106 aaKnown RBP3.03□□□□□ -1.92
XRCC4-202ENST00000338635 FBXL22Q6P050 247 aa3.03□□□□□ -1.92
XRCC4-202ENST00000338635 RBM44Q6ZP01 1051 aaKnown RBP3.03□□□□□ -1.92
XRCC4-202ENST00000338635 ZNF329Q86UD4 541 aa3.03□□□□□ -1.92
XRCC4-202ENST00000338635 OR56A3Q8NH54 315 aa3.03□□□□□ -1.92
XRCC4-202ENST00000338635 RBM38Q9H0Z9 239 aaKnown RBP3.03□□□□□ -1.92
XRCC4-202ENST00000338635 FZD3Q9NPG1 666 aa3.03□□□□□ -1.92
XRCC4-202ENST00000338635 PAPOLBQ9NRJ5 636 aaKnown RBP3.03□□□□□ -1.92
XRCC4-202ENST00000338635 STEAP1Q9UHE8 339 aa3.03□□□□□ -1.92
XRCC4-202ENST00000338635 RIMKLBQ9ULI2 386 aa3.03□□□□□ -1.92
XRCC4-202ENST00000338635 TNFRSF13BO14836 293 aaPredicted RBP3.02□□□□□ -1.93
XRCC4-202ENST00000338635 PRPF4O43172 522 aaKnown RBP eCLIP3.02□□□□□ -1.93
XRCC4-202ENST00000338635 PHGDHO43175 533 aaKnown RBP3.02□□□□□ -1.93
XRCC4-202ENST00000338635 CCP110O43303 1012 aa3.02□□□□□ -1.93
XRCC4-202ENST00000338635 CA12O43570 354 aa3.02□□□□□ -1.93
XRCC4-202ENST00000338635 ATG13O75143 517 aa3.02□□□□□ -1.93
XRCC4-202ENST00000338635 OFD1O75665 1012 aa3.02□□□□□ -1.93
XRCC4-202ENST00000338635 NCLP19338 710 aaKnown RBP3.02□□□□□ -1.93
XRCC4-202ENST00000338635 GALNSP34059 522 aa3.02□□□□□ -1.93
XRCC4-202ENST00000338635 ENTPD1P49961 510 aa3.02□□□□□ -1.93
XRCC4-202ENST00000338635 RRP1P56182 461 aaKnown RBP3.02□□□□□ -1.93
XRCC4-202ENST00000338635 AMPD3Q01432 767 aa3.02□□□□□ -1.93
XRCC4-202ENST00000338635 CCDC15Q0P6D6 951 aa3.02□□□□□ -1.93
XRCC4-202ENST00000338635 ST3GAL2Q16842 350 aa3.02□□□□□ -1.93
XRCC4-202ENST00000338635 TRAPPC11Q7Z392 1133 aa3.02□□□□□ -1.93
XRCC4-202ENST00000338635 DAAM2Q86T65 1068 aa3.02□□□□□ -1.93
XRCC4-202ENST00000338635 ADGRF4Q8IZF3 695 aa3.02□□□□□ -1.93
XRCC4-202ENST00000338635 NUP88Q99567 741 aaPredicted RBP3.02□□□□□ -1.93
XRCC4-202ENST00000338635 CINPQ9BW66 212 aaPredicted RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms