RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 BTBD19C9JJ37 291 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 SYN3O14994 580 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 ATXN8OSP0DMR3 200 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 AMD1P17707 334 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 EPHB2P29323 1055 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 MTHFRP42898 656 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 BCL2L1Q07817 233 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 PPP4R4Q6NUP7 873 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 CCDC197Q8NCU1 140 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 SPPL2BQ8TCT7 592 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 PPWD1Q96BP3 646 aaKnown RBP7.58□□□□□ -1.2
EPHA3-201ENST00000336596 CYTH2Q99418 400 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 VAT1Q99536 393 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 TCF25Q9BQ70 676 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 ASB3Q9Y575 518 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 SSU72P8A0A1W2PR75 194 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 E2F6O75461 281 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 PABPC1P11940 636 aaKnown RBP7.58□□□□□ -1.2
EPHA3-201ENST00000336596 TNNI3P19429 210 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 FXR1P51114 621 aaKnown RBP eCLIP7.58□□□□□ -1.2
EPHA3-201ENST00000336596 ACAP1Q15027 740 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 PAGE2BQ5JRK9 111 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 VSIG10LQ86VR7 867 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 CYP4Z1Q86W10 505 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 DHX40Q8IX18 779 aaKnown RBP7.58□□□□□ -1.2
EPHA3-201ENST00000336596 DDIASQ8IXT1 998 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 DACT3Q96B18 629 aaPredicted RBP7.58□□□□□ -1.2
EPHA3-201ENST00000336596 TMEM159Q96B96 161 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 PABPC3Q9H361 631 aaKnown RBP7.58□□□□□ -1.2
EPHA3-201ENST00000336596 MRTO4Q9UKD2 239 aaKnown RBP7.58□□□□□ -1.2
EPHA3-201ENST00000336596 TRHDEQ9UKU6 1024 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 PIK3CDO00329 1044 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 TXNDC9O14530 226 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 CYP26A1O43174 497 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 RAMP2O60895 175 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 TMPRSS15P98073 1019 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 SETMARQ53H47 684 aaPredicted RBP7.58□□□□□ -1.2
EPHA3-201ENST00000336596 OTOP1Q7RTM1 612 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 SLC9A7Q96T83 725 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 TMEM175Q9BSA9 504 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 ZNF556Q9HAH1 456 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 H2AFY2Q9P0M6 372 aaPredicted RBP7.58□□□□□ -1.2
EPHA3-201ENST00000336596 HCN3Q9P1Z3 774 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 LIMA1Q9UHB6 759 aaKnown RBP7.58□□□□□ -1.2
EPHA3-201ENST00000336596 CASTOR2A6NHX0 329 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 RASSF10A6NK89 507 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 MEIS2O14770 477 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 SRP72O76094 671 aaKnown RBP7.58□□□□□ -1.2
EPHA3-201ENST00000336596 EOMESO95936 686 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 DHX9Q08211 1270 aaKnown RBP7.58□□□□□ -1.2
EPHA3-201ENST00000336596 GPS1Q13098 491 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 MAD2L1Q13257 205 aaPredicted RBP7.58□□□□□ -1.2
EPHA3-201ENST00000336596 PUS10Q3MIT2 529 aaKnown RBP7.58□□□□□ -1.2
EPHA3-201ENST00000336596 SETD3Q86TU7 594 aaPredicted RBP7.58□□□□□ -1.2
EPHA3-201ENST00000336596 CDR2LQ86X02 465 aaPredicted RBP7.58□□□□□ -1.2
EPHA3-201ENST00000336596 DENND1AQ8TEH3 1009 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 ZNF384Q8TF68 577 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 SMG7Q92540 1137 aaKnown RBP7.58□□□□□ -1.2
EPHA3-201ENST00000336596 SEPT3Q9UH03 358 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 DTNAQ9Y4J8 743 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 C5P01031 1676 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 HACD1B0YJ81 288 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 GRM6O15303 877 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 TEX33O43247 280 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 SERPINF2P08697 491 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 ZNF7P17097 686 aaPredicted RBP7.58□□□□□ -1.2
EPHA3-201ENST00000336596 PTPN2P17706 415 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 PTGER2P43116 358 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 FMR1Q06787 632 aaKnown RBP eCLIP7.58□□□□□ -1.2
EPHA3-201ENST00000336596 ELP6Q0PNE2 266 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 HIF1AQ16665 826 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 AGAP9Q5VTM2 703 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 EXO5Q9H790 373 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 LRRC40Q9H9A6 602 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.58□□□□□ -1.2
EPHA3-201ENST00000336596 SLC27A6Q9Y2P4 619 aa7.58□□□□□ -1.2
EPHA3-201ENST00000336596 CCDC22O60826 627 aa7.57□□□□□ -1.2
EPHA3-201ENST00000336596 PALMO75781 387 aa7.57□□□□□ -1.2
EPHA3-201ENST00000336596 NCF2P19878 526 aaPredicted RBP7.57□□□□□ -1.2
EPHA3-201ENST00000336596 CHRM3P20309 590 aa7.57□□□□□ -1.2
EPHA3-201ENST00000336596 CNTFP26441 200 aa7.57□□□□□ -1.2
EPHA3-201ENST00000336596 NPTX2P47972 431 aa7.57□□□□□ -1.2
EPHA3-201ENST00000336596 TMEM164Q5U3C3 297 aa7.57□□□□□ -1.2
EPHA3-201ENST00000336596 RIBC1Q8N443 379 aaPredicted RBP7.57□□□□□ -1.2
EPHA3-201ENST00000336596 ATL1Q8WXF7 558 aa7.57□□□□□ -1.2
EPHA3-201ENST00000336596 RNF25Q96BH1 459 aaPredicted RBP7.57□□□□□ -1.2
EPHA3-201ENST00000336596 CXorf40BQ96DE9 158 aa7.57□□□□□ -1.2
EPHA3-201ENST00000336596 MCEEQ96PE7 176 aa7.57□□□□□ -1.2
EPHA3-201ENST00000336596 TTPALQ9BTX7 342 aa7.57□□□□□ -1.2
EPHA3-201ENST00000336596 METTL5Q9NRN9 209 aaKnown RBP7.57□□□□□ -1.2
EPHA3-201ENST00000336596 ABHD10Q9NUJ1 306 aa7.57□□□□□ -1.2
EPHA3-201ENST00000336596 TNFSF13BQ9Y275 285 aa7.57□□□□□ -1.2
EPHA3-201ENST00000336596 PCDHB11Q9Y5F2 797 aa7.57□□□□□ -1.2
EPHA3-201ENST00000336596 GLI3P10071 1580 aa7.57□□□□□ -1.2
EPHA3-201ENST00000336596 C10orf71Q711Q0 1435 aa7.57□□□□□ -1.2
EPHA3-201ENST00000336596 ATP9BO43861 1147 aa7.57□□□□□ -1.2
EPHA3-201ENST00000336596 PYGMP11217 842 aa7.57□□□□□ -1.2
EPHA3-201ENST00000336596 UBA1P22314 1058 aaKnown RBP7.57□□□□□ -1.2
EPHA3-201ENST00000336596 TLX1P31314 330 aaPredicted RBP7.57□□□□□ -1.2
EPHA3-201ENST00000336596 HTR7P34969 479 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms