RNA–Protein interactions for RNA: ENST00000333229.6

BRWD1-201, Transcript of bromodomain and WD repeat domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRWD1, Length 10,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1-201ENST00000333229 PHTF1Q9UMS5 762 aa13.71□□□□□ -0.21
BRWD1-201ENST00000333229 HOXD10P28358 340 aa13.71□□□□□ -0.22
BRWD1-201ENST00000333229 ADSLP30566 484 aaPredicted RBP13.71□□□□□ -0.22
BRWD1-201ENST00000333229 GP5P40197 560 aa13.71□□□□□ -0.22
BRWD1-201ENST00000333229 USP10Q14694 798 aaKnown RBP13.71□□□□□ -0.22
BRWD1-201ENST00000333229 LRRC69Q6ZNQ3 347 aa13.71□□□□□ -0.22
BRWD1-201ENST00000333229 CCDC126Q96EE4 140 aa13.71□□□□□ -0.22
BRWD1-201ENST00000333229 MXD3Q9BW11 206 aa13.71□□□□□ -0.22
BRWD1-201ENST00000333229 INTS2Q9H0H0 1204 aaKnown RBP13.71□□□□□ -0.22
BRWD1-201ENST00000333229 ARMC7Q9H6L4 198 aa13.71□□□□□ -0.22
BRWD1-201ENST00000333229 RBMX2Q9Y388 322 aaKnown RBP13.71□□□□□ -0.22
BRWD1-201ENST00000333229 CD3EAPO15446 510 aaKnown RBP13.71□□□□□ -0.22
BRWD1-201ENST00000333229 FSHRP23945 695 aa13.71□□□□□ -0.22
BRWD1-201ENST00000333229 VAMP7P51809 220 aa13.71□□□□□ -0.22
BRWD1-201ENST00000333229 MIER2Q8N344 545 aa13.71□□□□□ -0.22
BRWD1-201ENST00000333229 NUDT5Q9UKK9 219 aa13.71□□□□□ -0.22
BRWD1-201ENST00000333229 RABL2BQ9UNT1 228 aa13.71□□□□□ -0.22
BRWD1-201ENST00000333229 TCEA3O75764 348 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 FTLP02792 175 aaPredicted RBP13.7□□□□□ -0.22
BRWD1-201ENST00000333229 RAG1P15918 1043 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 CASP1P29466 404 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 ADD2P35612 726 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 SLC9A3P48764 834 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 AP3B2Q13367 1082 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 PDCD4Q53EL6 469 aaKnown RBP13.7□□□□□ -0.22
BRWD1-201ENST00000333229 RFFLQ8WZ73 363 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 FEM1BQ9UK73 627 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 PRPF3O43395 683 aaKnown RBP13.7□□□□□ -0.22
BRWD1-201ENST00000333229 OR6B1O95007 311 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 ERAP2Q6P179 960 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 ZNF615Q8N8J6 731 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 MYDGFQ969H8 173 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 MED28Q9H204 178 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 PNMA8BQ9ULN7 279 aaPredicted RBP13.7□□□□□ -0.22
BRWD1-201ENST00000333229 NR1H2P55055 460 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 AFTPHQ6ULP2 937 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 FAM118BQ9BPY3 351 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 STK33Q9BYT3 514 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 SSH3Q8TE77 659 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 LSM7Q9UK45 103 aaKnown RBP13.7□□□□□ -0.22
BRWD1-201ENST00000333229 SNX12Q9UMY4 172 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 DHFRP00374 187 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 ATP1A3P13637 1013 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 HSD17B4P51659 736 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 CDH18Q13634 790 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 ARAP3Q8WWN8 1544 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 HEATR9A2RTY3 570 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 PTGES3LE9PB15 166 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 RASA2Q15283 850 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 GALNTL6Q49A17 601 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 RAB43Q86YS6 212 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 ZNF512Q96ME7 567 aaPredicted RBP13.7□□□□□ -0.22
BRWD1-201ENST00000333229 FDPSP14324 419 aaKnown RBP13.7□□□□□ -0.22
BRWD1-201ENST00000333229 STOMP27105 288 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 GDI2P50395 445 aaKnown RBP13.7□□□□□ -0.22
BRWD1-201ENST00000333229 ARHGEF7Q14155 803 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 PABPC1LQ4VXU2 614 aaKnown RBP13.7□□□□□ -0.22
BRWD1-201ENST00000333229 ARID3BQ8IVW6 561 aaPredicted RBP13.7□□□□□ -0.22
BRWD1-201ENST00000333229 TTLL6Q8N841 843 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 NOTOA8MTQ0 251 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 USP17L15C9J2P7 530 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 USP17L13C9JLJ4 530 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 USP17L11C9JVI0 530 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 USP17L18D6R9N7 530 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 USP17L22D6RA61 530 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 USP17L17D6RBQ6 530 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 USP17L19D6RCP7 530 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 USP17L20D6RJB6 530 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 USP17L24Q0WX57 530 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 DRAP1Q14919 205 aaPredicted RBP13.7□□□□□ -0.22
BRWD1-201ENST00000333229 USP17L6PQ6QN14 398 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 TMC4Q7Z404 712 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 VPS9D1Q9Y2B5 631 aa13.7□□□□□ -0.22
BRWD1-201ENST00000333229 ATP6AP1LQ52LC2 224 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 RCOR2Q8IZ40 523 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 CAMKK1Q8N5S9 505 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 C12orf50Q8NA57 414 aaPredicted RBP13.69□□□□□ -0.22
BRWD1-201ENST00000333229 PARNO95453 639 aaKnown RBP13.69□□□□□ -0.22
BRWD1-201ENST00000333229 POLBP06746 335 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 SEC24CP53992 1094 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 AP3S2P59780 193 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 SWSAP1Q6NVH7 229 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 CHPFQ8IZ52 775 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 KBTBD7Q8WVZ9 684 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 PABPC5Q96DU9 382 aaKnown RBP13.69□□□□□ -0.22
BRWD1-201ENST00000333229 EDARQ9UNE0 448 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 SH3D21A4FU49 640 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 TRIM64A6NGJ6 449 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 TRIM64BA6NI03 449 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 CTSHP09668 335 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 MYBP10242 640 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 PTSQ03393 145 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 FAM83EQ2M2I3 478 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 ZNF613Q6PF04 617 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 PCDHA6Q9UN73 950 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 PCDHA8Q9Y5H6 950 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 FAM196BA6NMK8 535 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 LOC110117498-PIK3R3F6TDL0 507 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 IFNGR2P38484 337 aa13.69□□□□□ -0.22
BRWD1-201ENST00000333229 AADACL4Q5VUY2 407 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms