RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 IFNEQ86WN2 208 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 MREGQ8N565 214 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 CYFIP2Q96F07 1278 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 BBS4Q96RK4 519 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 TLR7Q9NYK1 1049 aaKnown RBP9.99□□□□□ -0.81
COL12A1-201ENST00000322507 AP3M1Q9Y2T2 418 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 C2CD2Q9Y426 696 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 MAGED1Q9Y5V3 778 aaPredicted RBP9.99□□□□□ -0.81
COL12A1-201ENST00000322507 ATXN2Q99700 1313 aaKnown RBP9.99□□□□□ -0.81
COL12A1-201ENST00000322507 KPNA5O15131 536 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 PTPN5P54829 565 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 NSL1Q96IY1 281 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 SLC13A1Q9BZW2 595 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 NEU2Q9Y3R4 380 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 EIF4E1BA6NMX2 242 aaKnown RBP9.99□□□□□ -0.81
COL12A1-201ENST00000322507 B3GALNT1O75752 331 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 GP5P40197 560 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 DCAF4L1Q3SXM0 396 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 EFHC1Q5JVL4 640 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 PGBD2Q6P3X8 592 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 FAM118BQ9BPY3 351 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 WHRNQ9P202 907 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 PCSK1NQ9UHG2 260 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 ZNF335Q9H4Z2 1342 aaPredicted RBP9.99□□□□□ -0.81
COL12A1-201ENST00000322507 MYH2Q9UKX2 1941 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 GSAPA4D1B5 854 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 RPS6KA4O75676 772 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 BMP10O95393 424 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 SRGNP10124 158 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 RAB4AP20338 218 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 OTUD4Q01804 1114 aaKnown RBP9.99□□□□□ -0.81
COL12A1-201ENST00000322507 TMEM132DQ14C87 1099 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 TOMM20Q15388 145 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 ATG14Q6ZNE5 492 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 ZNF624Q9P2J8 865 aaPredicted RBP9.99□□□□□ -0.81
COL12A1-201ENST00000322507 M0QX08 132 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 TIMM44O43615 452 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 PRLRP16471 622 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 CACHD1Q5VU97 1274 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 SMIM5Q71RC9 77 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.99□□□□□ -0.81
COL12A1-201ENST00000322507 PRDM16Q9HAZ2 1276 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 CD248Q9HCU0 757 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 MOSPD1Q9UJG1 213 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 DYRK1BQ9Y463 629 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 KCNN4O15554 427 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 PRKAA2P54646 552 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 NCAPHQ15003 741 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 ZBTB6Q15916 424 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 ASB12Q8WXK4 309 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 ERMAPQ96PL5 475 aaPredicted RBP9.99□□□□□ -0.81
COL12A1-201ENST00000322507 ISCUQ9H1K1 167 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 CYP4F11Q9HBI6 524 aa9.99□□□□□ -0.81
COL12A1-201ENST00000322507 XPO7Q9UIA9 1087 aaKnown RBP9.99□□□□□ -0.81
COL12A1-201ENST00000322507 MEI4A8MW99 385 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 WWP2O00308 870 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 ZBTB22O15209 634 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 GALNT3Q14435 633 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 PIGOQ8TEQ8 1089 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 S100A13Q99584 98 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 RNF146Q9NTX7 359 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 NDFIP2Q9NV92 336 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 LSP1P33241 339 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 COPAP53621 1224 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 KCNK10P57789 538 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 ST8SIA6P61647 398 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 ADAM17P78536 824 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 Q3C1V9 767 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 SCN4BQ8IWT1 228 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 SETD9Q8NE22 299 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 RAD54BQ9Y620 910 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 XRCC4Q13426 336 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 MAPK11Q15759 364 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 TTC23Q5W5X9 447 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 TTC30BQ8N4P2 665 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 MAFIPQ8WZ33 124 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 SLIT1O75093 1534 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 S100GP29377 79 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 ITGA9Q13797 1035 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 ARHGEF7Q14155 803 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 BOLA3Q53S33 107 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 AGAP9Q5VTM2 703 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 PRMT9Q6P2P2 845 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 ADGRF4Q8IZF3 695 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 PLEKHA8P1O95397 391 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 VCLP18206 1134 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 DYNLL1P63167 89 aaKnown RBP9.98□□□□□ -0.81
COL12A1-201ENST00000322507 NFIAQ12857 509 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 SBK1Q52WX2 424 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 CWF19L1Q69YN2 538 aaKnown RBP9.98□□□□□ -0.81
COL12A1-201ENST00000322507 PUS3Q9BZE2 481 aaKnown RBP9.98□□□□□ -0.81
COL12A1-201ENST00000322507 ZNF518BQ9C0D4 1074 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 ZNF222Q9UK12 451 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 EFCAB10A6NFE3 127 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 TM9SF1O15321 606 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 PRPF4O43172 522 aaKnown RBP eCLIP9.98□□□□□ -0.81
COL12A1-201ENST00000322507 KATNA1O75449 491 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 OSTNP61366 133 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 NCALDP61601 193 aa9.98□□□□□ -0.81
COL12A1-201ENST00000322507 ITGADQ13349 1161 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms