RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 GAD2Q05329 585 aa15.31■□□□□ 0.04
PPP1CA-201ENST00000312989 EFEMP1Q12805 493 aa15.31■□□□□ 0.04
PPP1CA-201ENST00000312989 MIB1Q86YT6 1006 aa15.31■□□□□ 0.04
PPP1CA-201ENST00000312989 FAM217AQ8IXS0 508 aa15.31■□□□□ 0.04
PPP1CA-201ENST00000312989 SHC3Q92529 594 aa15.31■□□□□ 0.04
PPP1CA-201ENST00000312989 PNKPQ96T60 521 aa15.31■□□□□ 0.04
PPP1CA-201ENST00000312989 NACA2Q9H009 215 aa15.31■□□□□ 0.04
PPP1CA-201ENST00000312989 UBE2TQ9NPD8 197 aaPredicted RBP15.31■□□□□ 0.04
PPP1CA-201ENST00000312989 SAMSN1Q9NSI8 373 aaKnown RBP15.31■□□□□ 0.04
PPP1CA-201ENST00000312989 HESX1Q9UBX0 185 aa15.31■□□□□ 0.04
PPP1CA-201ENST00000312989 APEX2Q9UBZ4 518 aa15.31■□□□□ 0.04
PPP1CA-201ENST00000312989 CCDC163A0A0D9SF12 145 aa15.3■□□□□ 0.04
PPP1CA-201ENST00000312989 CACNG3O60359 315 aa15.3■□□□□ 0.04
PPP1CA-201ENST00000312989 RALAP11233 206 aa15.3■□□□□ 0.04
PPP1CA-201ENST00000312989 KCNMA1Q12791 1236 aa15.3■□□□□ 0.04
PPP1CA-201ENST00000312989 PPP2R5DQ14738 602 aa15.3■□□□□ 0.04
PPP1CA-201ENST00000312989 TRIP4Q15650 581 aaPredicted RBP15.3■□□□□ 0.04
PPP1CA-201ENST00000312989 MEA1Q16626 185 aa15.3■□□□□ 0.04
PPP1CA-201ENST00000312989 EMC10Q5UCC4 262 aa15.3■□□□□ 0.04
PPP1CA-201ENST00000312989 BSPRYQ5W0U4 402 aa15.3■□□□□ 0.04
PPP1CA-201ENST00000312989 HEATR6Q6AI08 1181 aaKnown RBP15.3■□□□□ 0.04
PPP1CA-201ENST00000312989 DENND1BQ6P3S1 775 aa15.3■□□□□ 0.04
PPP1CA-201ENST00000312989 ARHGAP18Q8N392 663 aa15.3■□□□□ 0.04
PPP1CA-201ENST00000312989 IPO9Q96P70 1041 aaKnown RBP15.3■□□□□ 0.04
PPP1CA-201ENST00000312989 HHIPQ96QV1 700 aa15.3■□□□□ 0.04
PPP1CA-201ENST00000312989 LRRC4Q9HBW1 653 aa15.3■□□□□ 0.04
PPP1CA-201ENST00000312989 CD248Q9HCU0 757 aa15.3■□□□□ 0.04
PPP1CA-201ENST00000312989 CNGB3Q9NQW8 809 aa15.3■□□□□ 0.04
PPP1CA-201ENST00000312989 RASAL2Q9UJF2 1139 aa15.3■□□□□ 0.04
PPP1CA-201ENST00000312989 FBXO10Q9UK96 956 aa15.3■□□□□ 0.04
PPP1CA-201ENST00000312989 AGO1Q9UL18 857 aaKnown RBP15.3■□□□□ 0.04
PPP1CA-201ENST00000312989 ADAM23O75077 832 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 ATG13O75143 517 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 PENKP01210 267 aaPredicted RBP15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 CISD3P0C7P0 127 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 GRIA2P42262 883 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 SEC13P55735 322 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 KDSRQ06136 332 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 DMC1Q14565 340 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 STILQ15468 1287 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 MAN2A1Q16706 1144 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 EXOC3L4Q17RC7 722 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 HSP90AA4PQ58FG1 418 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 FYB2Q5VWT5 728 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 MSANTD2Q6P1R3 559 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 TMEM92Q6UXU6 159 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 GBP6Q6ZN66 633 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 TOGARAM2Q6ZUX3 1019 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 RASSF3Q86WH2 238 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 WDTC1Q8N5D0 677 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 NAT16Q8N8M0 369 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 IL17RCQ8NAC3 791 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 EDEM1Q92611 657 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 RUBCNQ92622 972 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 HSFY1Q96LI6 401 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 CDK5RAP1Q96SZ6 601 aaKnown RBP15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 SLC4A5Q9BY07 1137 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 ZDHHC4Q9NPG8 344 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 ARHGEF4Q9NR80 690 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 MARCH2Q9P0N8 246 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 STOML2Q9UJZ1 356 aa15.29■□□□□ 0.04
PPP1CA-201ENST00000312989 PIK3R2O00459 728 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 IGLV3-27P01718 113 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 PNMA6AP0CW24 399 aaPredicted RBP15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 LCP1P13796 627 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 TYRP14679 529 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 SLC8A3P57103 927 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 VWA3BQ502W6 1294 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 C2orf27AQ580R0 203 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 CT47A1Q5JQC4 288 aaPredicted RBP15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 CDKAL1Q5VV42 579 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 ENOSF1Q7L5Y1 443 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 TADA2BQ86TJ2 420 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 CAMKK1Q8N5S9 505 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 TERB1Q8NA31 727 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 ZNF606Q8WXB4 792 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 IRGQQ8WZA9 623 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 EXOC4Q96A65 974 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 TUBGCP2Q9BSJ2 902 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 NDST4Q9H3R1 872 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 PARD6AQ9NPB6 346 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 TJP2Q9UDY2 1190 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 EBF1Q9UH73 591 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 SFMBT1Q9UHJ3 866 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 CLEC4EQ9ULY5 219 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 MMP17Q9ULZ9 603 aa15.28■□□□□ 0.04
PPP1CA-201ENST00000312989 SLC12A8A0AV02 714 aa15.27■□□□□ 0.04
PPP1CA-201ENST00000312989 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.27■□□□□ 0.04
PPP1CA-201ENST00000312989 PRRT4C9JH25 899 aa15.27■□□□□ 0.04
PPP1CA-201ENST00000312989 NEDD8-MDP1E9PL57 170 aa15.27■□□□□ 0.04
PPP1CA-201ENST00000312989 SGK1O00141 431 aa15.27■□□□□ 0.04
PPP1CA-201ENST00000312989 MSI1O43347 362 aaKnown RBP15.27■□□□□ 0.04
PPP1CA-201ENST00000312989 CORO1AP31146 461 aaKnown RBP15.27■□□□□ 0.04
PPP1CA-201ENST00000312989 CNR2P34972 360 aa15.27■□□□□ 0.04
PPP1CA-201ENST00000312989 MTIF2P46199 727 aaKnown RBP15.27■□□□□ 0.04
PPP1CA-201ENST00000312989 MRPS21P82921 87 aaKnown RBP15.27■□□□□ 0.04
PPP1CA-201ENST00000312989 COG7P83436 770 aa15.27■□□□□ 0.04
PPP1CA-201ENST00000312989 LPAL2Q16609 132 aa15.27■□□□□ 0.04
PPP1CA-201ENST00000312989 ANO4Q32M45 955 aa15.27■□□□□ 0.04
PPP1CA-201ENST00000312989 RNF43Q68DV7 783 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms