RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 DGCR14Q96DF8 476 aaKnown RBP9.08□□□□□ -0.96
COL6A5-202ENST00000312481 ACSS3Q9H6R3 686 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 NMRAL1Q9HBL8 299 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 RABL2AQ9UBK7 228 aaPredicted RBP9.08□□□□□ -0.96
COL6A5-202ENST00000312481 RABL2BQ9UNT1 228 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 PLCH1Q4KWH8 1693 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 COL1A2P08123 1366 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 CENPXA8MT69 81 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 VWA5AO00534 786 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 ME2P23368 584 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 CDH17Q12864 832 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 C10orf62Q5T681 223 aaPredicted RBP9.08□□□□□ -0.96
COL6A5-202ENST00000312481 ATP8B4Q8TF62 1192 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 PDCD6IPQ8WUM4 868 aaKnown RBP9.08□□□□□ -0.96
COL6A5-202ENST00000312481 SEPT1Q8WYJ6 367 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 ETAA1Q9NY74 926 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.08□□□□□ -0.96
COL6A5-202ENST00000312481 UBQLN1Q9UMX0 589 aaKnown RBP9.08□□□□□ -0.96
COL6A5-202ENST00000312481 HEATR9A2RTY3 570 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 TRIM24O15164 1050 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 TLR2O60603 784 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 TALDO1P37837 337 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 CAPZA2P47755 286 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 MTF1Q14872 753 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 RASSF5Q8WWW0 418 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 UBXN6Q9BZV1 441 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 ITM2BQ9Y287 266 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 CAPN6Q9Y6Q1 641 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 CYP2D7A0A087X1C5 515 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 PLK4O00444 970 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 HOXD10P28358 340 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 CSE1LP55060 971 aaKnown RBP9.08□□□□□ -0.96
COL6A5-202ENST00000312481 TGM3Q08188 693 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 PLA2G4FQ68DD2 849 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 LDHDQ86WU2 507 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 DCP1BQ8IZD4 617 aaKnown RBP9.08□□□□□ -0.96
COL6A5-202ENST00000312481 TMEM86AQ8N2M4 240 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 NEUROG2Q9H2A3 272 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 ZCCHC17Q9NP64 241 aaKnown RBP9.08□□□□□ -0.96
COL6A5-202ENST00000312481 EIF2B3Q9NR50 452 aaKnown RBP9.08□□□□□ -0.96
COL6A5-202ENST00000312481 FBXO28Q9NVF7 368 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 ATP6V1HQ9UI12 483 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 USP1O94782 785 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 DGUOKQ16854 277 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 MTERF2Q49AM1 385 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 P3H2Q8IVL5 708 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 IMPAD1Q9NX62 359 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 NDUFAF1Q9Y375 327 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 TCRBV5S4A2TA0A5A2 114 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 ZSCAN5CA6NGD5 496 aaPredicted RBP9.07□□□□□ -0.96
COL6A5-202ENST00000312481 SNX3O60493 162 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 VPS26AO75436 327 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 NDUFS3O75489 264 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 FAM200BP0CF97 657 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 KRT6CP48668 564 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 ATXN3P54252 364 aaPredicted RBP9.07□□□□□ -0.96
COL6A5-202ENST00000312481 HERVK_113P62684 666 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 CYP24A1Q07973 514 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 GALNT18Q6P9A2 607 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 AMER2Q8N7J2 671 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 EHD1Q9H4M9 534 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 PNPLA8Q9NP80 782 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 GABBR1Q9UBS5 961 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 MAGEC1O60732 1142 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 CAMTA2O94983 1202 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 PBX1P40424 430 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 FBXW10Q5XX13 1052 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 FAM45BPQ6NSW5 357 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 SLC30A8Q8IWU4 369 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 RP9Q8TA86 221 aaKnown RBP9.07□□□□□ -0.96
COL6A5-202ENST00000312481 NKX2-3Q8TAU0 364 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 HEXDCQ8WVB3 486 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 OXNAD1Q96HP4 312 aaPredicted RBP9.07□□□□□ -0.96
COL6A5-202ENST00000312481 ANLNQ9NQW6 1124 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 TMEM45AQ9NWC5 275 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 RPS6KA6Q9UK32 745 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 NBPF26B4DH59 902 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 BCL10O95999 233 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 POLR2EP19388 210 aaKnown RBP9.07□□□□□ -0.96
COL6A5-202ENST00000312481 TOB1P50616 345 aaPredicted RBP9.07□□□□□ -0.96
COL6A5-202ENST00000312481 CASP5P51878 434 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 DYNLT1P63172 113 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 TSNQ15631 228 aaKnown RBP9.07□□□□□ -0.96
COL6A5-202ENST00000312481 C11orf88Q6PI97 169 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 TXNDC11Q6PKC3 985 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 NBPF15Q8N660 670 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 MIEF2Q96C03 454 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 DPP7Q9UHL4 492 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 ZNF229Q9UJW7 825 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 LSM1O15116 133 aaKnown RBP9.07□□□□□ -0.96
COL6A5-202ENST00000312481 PRKCBP05771 671 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 ODC1P11926 461 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 S100A1P23297 94 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 TMTC4Q5T4D3 741 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 CLEC4FQ8N1N0 589 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 GOLM1Q8NBJ4 401 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 TTC16Q8NEE8 873 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 SNIP1Q8TAD8 396 aaKnown RBP9.07□□□□□ -0.96
COL6A5-202ENST00000312481 ENKURQ8TC29 256 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 MCEEQ96PE7 176 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms