RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 FNIP2Q9P278 1114 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 PATJQ8NI35 1801 aa23.47■■□□□ 1.35
IRF3-201ENST00000309877 A0A1W2PQH9 124 aa23.47■■□□□ 1.35
IRF3-201ENST00000309877 CD48P09326 243 aa23.47■■□□□ 1.35
IRF3-201ENST00000309877 CTSAP10619 480 aa23.47■■□□□ 1.35
IRF3-201ENST00000309877 ATF2P15336 505 aa23.47■■□□□ 1.35
IRF3-201ENST00000309877 CTNNB1P35222 781 aa23.47■■□□□ 1.35
IRF3-201ENST00000309877 BMPR1AP36894 532 aa23.47■■□□□ 1.35
IRF3-201ENST00000309877 USP46P62068 366 aa23.47■■□□□ 1.35
IRF3-201ENST00000309877 KLF1Q13351 362 aaPredicted RBP23.47■■□□□ 1.35
IRF3-201ENST00000309877 ZC3H12AQ5D1E8 599 aaKnown RBP23.47■■□□□ 1.35
IRF3-201ENST00000309877 RASIP1Q5U651 963 aa23.47■■□□□ 1.35
IRF3-201ENST00000309877 SND1Q7KZF4 910 aaKnown RBP eCLIP23.47■■□□□ 1.35
IRF3-201ENST00000309877 SCD5Q86SK9 330 aa23.47■■□□□ 1.35
IRF3-201ENST00000309877 FBXO32Q969P5 355 aa23.47■■□□□ 1.35
IRF3-201ENST00000309877 PGAP3Q96FM1 320 aaPredicted RBP23.47■■□□□ 1.35
IRF3-201ENST00000309877 CEP295NLQ96MC4 621 aa23.47■■□□□ 1.35
IRF3-201ENST00000309877 MAK16Q9BXY0 300 aaKnown RBP23.47■■□□□ 1.35
IRF3-201ENST00000309877 HOMER3Q9NSC5 361 aa23.47■■□□□ 1.35
IRF3-201ENST00000309877 PIGVQ9NUD9 493 aa23.47■■□□□ 1.35
IRF3-201ENST00000309877 HSFX1Q9UBD0 423 aa23.47■■□□□ 1.35
IRF3-201ENST00000309877 EFR3BQ9Y2G0 817 aa23.47■■□□□ 1.35
IRF3-201ENST00000309877 RWDD3Q9Y3V2 267 aa23.47■■□□□ 1.35
IRF3-201ENST00000309877 NR2E3Q9Y5X4 410 aa23.47■■□□□ 1.35
IRF3-201ENST00000309877 RAD51CO43502 376 aa23.46■■□□□ 1.35
IRF3-201ENST00000309877 TUBBP07437 444 aa23.46■■□□□ 1.35
IRF3-201ENST00000309877 SLC7A5Q01650 507 aa23.46■■□□□ 1.35
IRF3-201ENST00000309877 CYP1B1Q16678 543 aa23.46■■□□□ 1.35
IRF3-201ENST00000309877 CCDC185Q8N715 623 aa23.46■■□□□ 1.35
IRF3-201ENST00000309877 RNF139Q8WU17 664 aa23.46■■□□□ 1.35
IRF3-201ENST00000309877 C1orf54Q8WWF1 131 aa23.46■■□□□ 1.35
IRF3-201ENST00000309877 CYP4F11Q9HBI6 524 aa23.46■■□□□ 1.35
IRF3-201ENST00000309877 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.46■■□□□ 1.356e-9■■■■□ 20.1
IRF3-201ENST00000309877 AMACRQ9UHK6 382 aa23.46■■□□□ 1.35
IRF3-201ENST00000309877 AP4E1Q9UPM8 1137 aa23.46■■□□□ 1.35
IRF3-201ENST00000309877 SLC38A8A6NNN8 435 aa23.45■■□□□ 1.34
IRF3-201ENST00000309877 SEC24AO95486 1093 aa23.45■■□□□ 1.34
IRF3-201ENST00000309877 GBP1P32455 592 aa23.45■■□□□ 1.34
IRF3-201ENST00000309877 ELF1P32519 619 aa23.45■■□□□ 1.34
IRF3-201ENST00000309877 ARSEP51690 589 aa23.45■■□□□ 1.34
IRF3-201ENST00000309877 TAZQ16635 292 aa23.45■■□□□ 1.34
IRF3-201ENST00000309877 TMC7Q7Z402 723 aa23.45■■□□□ 1.34
IRF3-201ENST00000309877 RFX6Q8HWS3 928 aa23.45■■□□□ 1.34
IRF3-201ENST00000309877 DQX1Q8TE96 717 aaKnown RBP23.45■■□□□ 1.34
IRF3-201ENST00000309877 HDAC7Q8WUI4 952 aa23.45■■□□□ 1.34
IRF3-201ENST00000309877 RUNDC3BQ96NL0 473 aa23.45■■□□□ 1.34
IRF3-201ENST00000309877 PNKPQ96T60 521 aa23.45■■□□□ 1.34
IRF3-201ENST00000309877 DHX35Q9H5Z1 703 aaKnown RBP23.45■■□□□ 1.34
IRF3-201ENST00000309877 NMUR1Q9HB89 426 aa23.45■■□□□ 1.34
IRF3-201ENST00000309877 RXFP1Q9HBX9 757 aa23.45■■□□□ 1.34
IRF3-201ENST00000309877 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.45■■□□□ 1.343e-8■□□□□ 10.2
IRF3-201ENST00000309877 GMIPQ9P107 970 aa23.45■■□□□ 1.34
IRF3-201ENST00000309877 KIAA1671Q9BY89 1806 aa23.45■■□□□ 1.34
IRF3-201ENST00000309877 LILRB3O75022 631 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 CXCL14O95715 111 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 ATF6P18850 670 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 MCM3P25205 808 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 MTMR3Q13615 1198 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 DPYSL3Q14195 570 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 CA9Q16790 459 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 TAC4Q86UU9 113 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 PSTKQ8IV42 348 aaKnown RBP23.44■■□□□ 1.34
IRF3-201ENST00000309877 C12orf50Q8NA57 414 aaPredicted RBP23.44■■□□□ 1.34
IRF3-201ENST00000309877 PLEKHA4Q9H4M7 779 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 LRRC19Q9H756 370 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 PCDH18Q9HCL0 1135 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 STIM2Q9P246 746 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 DMGDHQ9UI17 866 aaKnown RBP23.44■■□□□ 1.34
IRF3-201ENST00000309877 FZD10Q9ULW2 581 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 FAM92AA1XBS5 289 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 TEX28O15482 410 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 COILP38432 576 aaPredicted RBP23.44■■□□□ 1.34
IRF3-201ENST00000309877 ALDH1A3P47895 512 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 PGFP49763 221 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 DR1Q01658 176 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 ADCY2Q08462 1091 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 TAF10Q12962 218 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 PPP6R3Q5H9R7 873 aaPredicted RBP23.44■■□□□ 1.34
IRF3-201ENST00000309877 C9orf50Q5SZB4 431 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 CCDC137Q6PK04 289 aaKnown RBP23.44■■□□□ 1.34
IRF3-201ENST00000309877 ANKRD7Q92527 254 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 RNF34Q969K3 372 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 DCLK3Q9C098 648 aa23.44■■□□□ 1.34
IRF3-201ENST00000309877 TLR8Q9NR97 1041 aaKnown RBP23.44■■□□□ 1.34
IRF3-201ENST00000309877 MAGED2Q9UNF1 606 aaPredicted RBP23.44■■□□□ 1.34
IRF3-201ENST00000309877 LINC01553A4QN01 128 aa23.43■■□□□ 1.34
IRF3-201ENST00000309877 PRRG1O14668 218 aa23.43■■□□□ 1.34
IRF3-201ENST00000309877 CST8O60676 142 aa23.43■■□□□ 1.34
IRF3-201ENST00000309877 HEXIM1O94992 359 aaKnown RBP23.43■■□□□ 1.34
IRF3-201ENST00000309877 L1CAMP32004 1257 aa23.43■■□□□ 1.34
IRF3-201ENST00000309877 MAGEA10P43363 369 aaPredicted RBP23.43■■□□□ 1.34
IRF3-201ENST00000309877 FNTAP49354 379 aa23.43■■□□□ 1.34
IRF3-201ENST00000309877 PSEN1P49768 467 aa23.43■■□□□ 1.34
IRF3-201ENST00000309877 AIF1P55008 147 aa23.43■■□□□ 1.34
IRF3-201ENST00000309877 DYNLT1P63172 113 aa23.43■■□□□ 1.34
IRF3-201ENST00000309877 MMRN1Q13201 1228 aa23.43■■□□□ 1.34
IRF3-201ENST00000309877 SNX1Q13596 522 aa23.43■■□□□ 1.34
IRF3-201ENST00000309877 DHX34Q14147 1143 aaKnown RBP23.43■■□□□ 1.34
IRF3-201ENST00000309877 DPYSL2Q16555 572 aa23.43■■□□□ 1.34
IRF3-201ENST00000309877 CCNG2Q16589 344 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms