RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 AXIN1O15169 862 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 ASNA1O43681 348 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 POMCP01189 267 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 RRM2P31350 389 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 CHRNB3Q05901 458 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 PGBD2Q6P3X8 592 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 KDM7AQ6ZMT4 941 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 SERAC1Q96JX3 654 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 APBA2Q99767 749 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 SPATA16Q9BXB7 569 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 SEMA6BQ9H3T3 888 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 NRDE2Q9H7Z3 1164 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 ACP6Q9NPH0 428 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 RPS6KB2Q9UBS0 482 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 AP4E1Q9UPM8 1137 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 TNPO2O14787 897 aaKnown RBP12.99□□□□□ -0.33
USP38-201ENST00000307017 CEBPGP53567 150 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 PHACTR4Q8IZ21 702 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 COLGALT1Q8NBJ5 622 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 FBXO25Q8TCJ0 367 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 ATP8B4Q8TF62 1192 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 SLC5A5Q92911 643 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 MTMR4Q9NYA4 1195 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 PTCH1Q13635 1447 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 AREL1O15033 823 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 SASH3O75995 380 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 HLA-DQA2P01906 255 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 SKIV2L2P42285 1042 aaKnown RBP12.99□□□□□ -0.33
USP38-201ENST00000307017 LPIN1Q14693 890 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 LDLRAP1Q5SW96 308 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 ELMO1Q92556 727 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 AVENQ9NQS1 362 aaPredicted RBP12.99□□□□□ -0.33
USP38-201ENST00000307017 OGDHLQ9ULD0 1010 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 NAALADL1Q9UQQ1 740 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 FAM200BP0CF97 657 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 SERPINB9P50453 376 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 ORC2Q13416 577 aaPredicted RBP12.99□□□□□ -0.33
USP38-201ENST00000307017 NR6A1Q15406 480 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 TMEM26Q6ZUK4 368 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 SGSM3Q96HU1 749 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 KLHL31Q9H511 634 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 POMKQ9H5K3 350 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 RHOBTB3O94955 611 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 STIP1P31948 543 aaKnown RBP12.98□□□□□ -0.33
USP38-201ENST00000307017 CCT3P49368 545 aaKnown RBP12.98□□□□□ -0.33
USP38-201ENST00000307017 TRADDQ15628 312 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 ANGEL2Q5VTE6 544 aaKnown RBP12.98□□□□□ -0.33
USP38-201ENST00000307017 TRIQKQ629K1 86 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 TRAPPC11Q7Z392 1133 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 FNDC5Q8NAU1 212 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 TCP10LQ8TDR4 215 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 DTNBP1Q96EV8 351 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 CATSPERBQ9H7T0 1116 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 BPIFA1Q9NP55 256 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 KCNH7Q9NS40 1196 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 USP18Q9UMW8 372 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 BCORL1Q5H9F3 1711 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 MGAT4DA6NG13 374 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 FAM25EA8MYX2 175 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 PSTPIP1O43586 416 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 DCXO43602 365 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 CSF1RP07333 972 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 CCDC130P13994 396 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 CDH8P55286 799 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 PKN2Q16513 984 aaKnown RBP12.98□□□□□ -0.33
USP38-201ENST00000307017 CACHD1Q5VU97 1274 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 MFSD14CQ5VZR4 134 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 TRIM65Q6PJ69 517 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 ZNF571Q7Z3V5 609 aaPredicted RBP12.98□□□□□ -0.33
USP38-201ENST00000307017 LRRC6Q86X45 466 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 RNASE11Q8TAA1 199 aaKnown RBP12.98□□□□□ -0.33
USP38-201ENST00000307017 CIDEBQ9UHD4 219 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 CNTNAP2Q9UHC6 1331 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 PRKAG1P54619 331 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 COL9A2Q14055 689 aaPredicted RBP12.98□□□□□ -0.33
USP38-201ENST00000307017 PDK1Q15118 436 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 SYDE1Q6ZW31 735 aaPredicted RBP12.98□□□□□ -0.33
USP38-201ENST00000307017 DEFB128Q7Z7B8 93 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 SLC41A1Q8IVJ1 513 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 FBXO16Q8IX29 292 aaPredicted RBP12.98□□□□□ -0.33
USP38-201ENST00000307017 JMJD4Q9H9V9 463 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 ABCB10Q9NRK6 738 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 TAGLN3Q9UI15 199 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 CFAP99D6REC4 459 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 SEMA3DO95025 777 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 BCL10O95999 233 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 ERVK-10P10266 1014 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 UMPSP11172 480 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 RRM1P23921 792 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 SCNN1BP51168 640 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 NCKAP1LP55160 1127 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 MAPK7Q13164 816 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 CUL2Q13617 745 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 BOP1Q14137 746 aaKnown RBP12.98□□□□□ -0.33
USP38-201ENST00000307017 OR6Y1Q8NGX8 325 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 NFKBIZQ9BYH8 718 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 TMEM8AQ9HCN3 771 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 ZFYVE16Q7Z3T8 1539 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 TISP43B9A030 160 aa12.98□□□□□ -0.33
USP38-201ENST00000307017 PSIP1O75475 530 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms