RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ETFBKMTQ8IXQ9 262 aa27.72■■■□□ 2.03
CDKN2A-201ENST00000304494 SLC35F5Q8WV83 523 aa27.72■■■□□ 2.03
CDKN2A-201ENST00000304494 CRACR2AQ9BSW2 395 aa27.72■■■□□ 2.03
CDKN2A-201ENST00000304494 DCLK3Q9C098 648 aa27.72■■■□□ 2.03
CDKN2A-201ENST00000304494 MARCH2Q9P0N8 246 aa27.72■■■□□ 2.03
CDKN2A-201ENST00000304494 WDR35Q9P2L0 1181 aa27.72■■■□□ 2.03
CDKN2A-201ENST00000304494 DEC1Q9P2X7 70 aa27.72■■■□□ 2.03
CDKN2A-201ENST00000304494 HRO43593 1189 aa27.71■■■□□ 2.03
CDKN2A-201ENST00000304494 TNFRSF4P43489 277 aa27.71■■■□□ 2.03
CDKN2A-201ENST00000304494 KDSRQ06136 332 aa27.71■■■□□ 2.03
CDKN2A-201ENST00000304494 C2orf27AQ580R0 203 aa27.71■■■□□ 2.03
CDKN2A-201ENST00000304494 CT47A1Q5JQC4 288 aaPredicted RBP27.71■■■□□ 2.03
CDKN2A-201ENST00000304494 Q6ZNB5 142 aa27.71■■■□□ 2.03
CDKN2A-201ENST00000304494 PRR23BQ6ZRT6 265 aa27.71■■■□□ 2.03
CDKN2A-201ENST00000304494 BHLHA9Q7RTU4 235 aa27.71■■■□□ 2.03
CDKN2A-201ENST00000304494 NAT16Q8N8M0 369 aa27.71■■■□□ 2.03
CDKN2A-201ENST00000304494 XPO6Q96QU8 1125 aaKnown RBP27.71■■■□□ 2.03
CDKN2A-201ENST00000304494 ZSWIM1Q9BR11 485 aa27.71■■■□□ 2.03
CDKN2A-201ENST00000304494 MARK1Q9P0L2 795 aa27.71■■■□□ 2.03
CDKN2A-201ENST00000304494 GMEB2Q9UKD1 530 aa27.71■■■□□ 2.03
CDKN2A-201ENST00000304494 NEDD8-MDP1E9PL57 170 aa27.7■■■□□ 2.02
CDKN2A-201ENST00000304494 TULP3O75386 442 aa27.7■■■□□ 2.02
CDKN2A-201ENST00000304494 APBB3O95704 486 aa27.7■■■□□ 2.02
CDKN2A-201ENST00000304494 LCP1P13796 627 aa27.7■■■□□ 2.02
CDKN2A-201ENST00000304494 EXOC3L4Q17RC7 722 aa27.7■■■□□ 2.02
CDKN2A-201ENST00000304494 HSF5Q4G112 596 aaPredicted RBP27.7■■■□□ 2.02
CDKN2A-201ENST00000304494 LAIR1Q6GTX8 287 aa27.7■■■□□ 2.02
CDKN2A-201ENST00000304494 RNF139Q8WU17 664 aa27.7■■■□□ 2.02
CDKN2A-201ENST00000304494 HHIPQ96QV1 700 aa27.7■■■□□ 2.02
CDKN2A-201ENST00000304494 BBS2Q9BXC9 721 aa27.7■■■□□ 2.02
CDKN2A-201ENST00000304494 APEX2Q9UBZ4 518 aa27.7■■■□□ 2.02
CDKN2A-201ENST00000304494 GOLGA6L22H0YM25 854 aa27.69■■■□□ 2.02
CDKN2A-201ENST00000304494 MED7O43513 233 aa27.69■■■□□ 2.02
CDKN2A-201ENST00000304494 CHKAP35790 457 aa27.69■■■□□ 2.02
CDKN2A-201ENST00000304494 PXNP49023 591 aaPredicted RBP27.69■■■□□ 2.02
CDKN2A-201ENST00000304494 MAN2A1Q16706 1144 aa27.69■■■□□ 2.02
CDKN2A-201ENST00000304494 BSPRYQ5W0U4 402 aa27.69■■■□□ 2.02
CDKN2A-201ENST00000304494 PMF1Q6P1K2 205 aa27.69■■■□□ 2.02
CDKN2A-201ENST00000304494 TPGS1Q6ZTW0 290 aa27.69■■■□□ 2.02
CDKN2A-201ENST00000304494 CEP68Q76N32 757 aa27.69■■■□□ 2.02
CDKN2A-201ENST00000304494 PHTF2Q8N3S3 785 aa27.69■■■□□ 2.02
CDKN2A-201ENST00000304494 GPR161Q8N6U8 529 aaKnown RBP27.69■■■□□ 2.02
CDKN2A-201ENST00000304494 IRGQQ8WZA9 623 aa27.69■■■□□ 2.02
CDKN2A-201ENST00000304494 NDRG1Q92597 394 aaKnown RBP27.69■■■□□ 2.02
CDKN2A-201ENST00000304494 HSFY1Q96LI6 401 aa27.69■■■□□ 2.02
CDKN2A-201ENST00000304494 ABCC13Q9NSE7 274 aa27.69■■■□□ 2.02
CDKN2A-201ENST00000304494 POLR3BQ9NW08 1133 aaPredicted RBP27.69■■■□□ 2.02
CDKN2A-201ENST00000304494 MMP17Q9ULZ9 603 aa27.69■■■□□ 2.02
CDKN2A-201ENST00000304494 RIF1Q5UIP0 2472 aaKnown RBP27.69■■■□□ 2.02
CDKN2A-201ENST00000304494 KIAA1549LQ6ZVL6 1849 aa27.69■■■□□ 2.02
CDKN2A-201ENST00000304494 FAM186AA6NE01 2351 aa27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 SLC12A8A0AV02 714 aa27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 TBC1D3BA6NDS4 549 aa27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 YJEFN3A6XGL0 299 aa27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 E7ENQ6 273 aa27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 CACNG3O60359 315 aa27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 HMBSP08397 361 aa27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 TYRP14679 529 aa27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 SLC9A1P19634 815 aa27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 CORO1AP31146 461 aaKnown RBP27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 HOXC13P31276 330 aa27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 RGS7P49802 495 aa27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 DAOAP59103 153 aa27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 MESP2Q0VG99 397 aa27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 SRSF5Q13243 272 aaKnown RBP27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 MEA1Q16626 185 aa27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 SMYD5Q6GMV2 418 aa27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 DCLK2Q8N568 766 aa27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 GAB3Q8WWW8 586 aa27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 PLD4Q96BZ4 506 aa27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 DNAJC17Q9NVM6 304 aaKnown RBP27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 EBF1Q9UH73 591 aa27.68■■■□□ 2.02
CDKN2A-201ENST00000304494 CALCAP01258 141 aa27.67■■■□□ 2.02
CDKN2A-201ENST00000304494 GRAMD4Q6IC98 578 aa27.67■■■□□ 2.02
CDKN2A-201ENST00000304494 TERB1Q8NA31 727 aa27.67■■■□□ 2.02
CDKN2A-201ENST00000304494 TSTD1Q8NFU3 115 aa27.67■■■□□ 2.02
CDKN2A-201ENST00000304494 KCNV2Q8TDN2 545 aa27.67■■■□□ 2.02
CDKN2A-201ENST00000304494 GOLGA1Q92805 767 aa27.67■■■□□ 2.02
CDKN2A-201ENST00000304494 AXIN1O15169 862 aa27.66■■■□□ 2.02
CDKN2A-201ENST00000304494 RPP40O75818 363 aaKnown RBP27.66■■■□□ 2.02
CDKN2A-201ENST00000304494 FBXO21O94952 628 aa27.66■■■□□ 2.02
CDKN2A-201ENST00000304494 KLKB1P03952 638 aa27.66■■■□□ 2.02
CDKN2A-201ENST00000304494 PRKCSHP14314 528 aaPredicted RBP27.66■■■□□ 2.02
CDKN2A-201ENST00000304494 PON1P27169 355 aa27.66■■■□□ 2.02
CDKN2A-201ENST00000304494 TIE1P35590 1138 aa27.66■■■□□ 2.02
CDKN2A-201ENST00000304494 KIR2DL1P43626 348 aaPredicted RBP27.66■■■□□ 2.02
CDKN2A-201ENST00000304494 LPAL2Q16609 132 aa27.66■■■□□ 2.02
CDKN2A-201ENST00000304494 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.66■■■□□ 2.02
CDKN2A-201ENST00000304494 SFTPA1Q8IWL2 248 aa27.66■■■□□ 2.02
CDKN2A-201ENST00000304494 KIAA2013Q8IYS2 634 aa27.66■■■□□ 2.02
CDKN2A-201ENST00000304494 CCDC33Q8N5R6 958 aa27.66■■■□□ 2.02
CDKN2A-201ENST00000304494 EDEM1Q92611 657 aa27.66■■■□□ 2.02
CDKN2A-201ENST00000304494 HBS1LQ9Y450 684 aaKnown RBP27.66■■■□□ 2.02
CDKN2A-201ENST00000304494 WDR87Q6ZQQ6 2873 aa27.66■■■□□ 2.02
CDKN2A-201ENST00000304494 GNA15P30679 374 aa27.65■■■□□ 2.02
CDKN2A-201ENST00000304494 DGKEP52429 567 aa27.65■■■□□ 2.02
CDKN2A-201ENST00000304494 ARHGAP44Q17R89 818 aa27.65■■■□□ 2.02
CDKN2A-201ENST00000304494 EOGTQ5NDL2 527 aa27.65■■■□□ 2.02
CDKN2A-201ENST00000304494 GJB7Q6PEY0 223 aa27.65■■■□□ 2.02
CDKN2A-201ENST00000304494 TRMT11Q7Z4G4 463 aaKnown RBP27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms