RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 KCNJ1P48048 391 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 SEC24CP53992 1094 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 TRAF3Q13114 568 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 NAB2Q15742 525 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 LIN54Q6MZP7 749 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 CBWD2Q8IUF1 395 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 TMEM169Q96HH4 297 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 TPD52L3Q96J77 140 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 SEPHS2Q99611 448 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 NRDE2Q9H7Z3 1164 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 CD209Q9NNX6 404 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 HAO1Q9UJM8 370 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 RBM7Q9Y580 266 aaKnown RBP10.68□□□□□ -0.7
CLIP1-201ENST00000302528 SSU72P8A0A1W2PR75 194 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 PHGDHO43175 533 aaKnown RBP10.68□□□□□ -0.7
CLIP1-201ENST00000302528 RGS20O76081 388 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 CRTAMO95727 393 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 ITGA3P26006 1051 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 RFC5P40937 340 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 TAF6P49848 677 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 RCAN1P53805 252 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 SYNE4Q8N205 404 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 MED8Q96G25 268 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 ERP44Q9BS26 406 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 COLEC11Q9BWP8 271 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 CELF4Q9BZC1 486 aaKnown RBP10.68□□□□□ -0.7
CLIP1-201ENST00000302528 NIF3L1Q9GZT8 377 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 RACGAP1Q9H0H5 632 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 ARHGAP28Q9P2N2 729 aa10.68□□□□□ -0.7
CLIP1-201ENST00000302528 AP3D1O14617 1153 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 RBP1P09455 135 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 CYP2C8P10632 490 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 IFNGR2P38484 337 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 PNPLA4P41247 253 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 SLC29A2Q14542 456 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 PDIA6Q15084 440 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 RORBQ92753 470 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 DPY30Q9C005 99 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 DCP1AQ9NPI6 582 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-201ENST00000302528 TRIM66O15016 1216 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 TM9SF1O15321 606 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 CKMP06732 381 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 CYP2B6P20813 491 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 FASP25445 335 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 CLK2P49760 499 aaKnown RBP10.67□□□□□ -0.7
CLIP1-201ENST00000302528 MTMR2Q13614 643 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 BOLA3Q53S33 107 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 MIIPQ5JXC2 388 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 RPTNQ6XPR3 784 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 LRRC6Q86X45 466 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 SLC13A5Q86YT5 568 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-201ENST00000302528 MIB1Q86YT6 1006 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 CCNJLQ8IV13 435 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 HPDLQ96IR7 371 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 TMA7Q9Y2S6 64 aaKnown RBP10.67□□□□□ -0.7
CLIP1-201ENST00000302528 EFCAB10A6NFE3 127 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 TAF4O00268 1085 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 PCDH8O95206 1070 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 NPTXRO95502 500 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 RHOAP61586 193 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 DGUOKQ16854 277 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 ULK3Q6PHR2 472 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 EEF1AKMT1Q8WVE0 214 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 ZIM3Q96PE6 472 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 PAIP1Q9H074 479 aaKnown RBP10.67□□□□□ -0.7
CLIP1-201ENST00000302528 LY9Q9HBG7 655 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 UBE2QL1A1L167 161 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 SLCO1B7G3V0H7 640 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 ZW10O43264 779 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 COILP38432 576 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-201ENST00000302528 PRKAA1Q13131 559 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 TRMT11Q7Z4G4 463 aaKnown RBP10.67□□□□□ -0.7
CLIP1-201ENST00000302528 IQCF2Q8IXL9 164 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 CHPFQ8IZ52 775 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 HPS3Q969F9 1004 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 ACSF2Q96CM8 615 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-201ENST00000302528 TMEM138Q9NPI0 162 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 DNAJC16Q9Y2G8 782 aa10.67□□□□□ -0.7
CLIP1-201ENST00000302528 RNF17Q9BXT8 1623 aaKnown RBP10.67□□□□□ -0.7
CLIP1-201ENST00000302528 IQCMA0A1B0GVH7 501 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 H7C4K7 107 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 KLHL41O60662 606 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 EGFRP00533 1210 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 FAM58BPP0C7Q3 252 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 RXRGP48443 463 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 ATP2C1P98194 919 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-201ENST00000302528 RD3Q7Z3Z2 195 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 VPS28Q9UK41 221 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 ZDHHC9Q9Y397 364 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 TPRKBQ9Y3C4 175 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 PDS5AQ29RF7 1337 aaKnown RBP10.66□□□□□ -0.7
CLIP1-201ENST00000302528 ARHGAP31Q2M1Z3 1444 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 IQSEC2Q5JU85 1478 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 QRICH2Q9H0J4 1663 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 PRAMEF22A3QJZ6 481 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 CCNT2O60583 730 aaKnown RBP10.66□□□□□ -0.7
CLIP1-201ENST00000302528 TOB2Q14106 344 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-201ENST00000302528 PDIA5Q14554 519 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 PTGISQ16647 500 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 OTUD3Q5T2D3 398 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms