RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 RPL10AP62906 217 aaKnown RBP13.53□□□□□ -0.24
CCDC7-202ENST00000302316 DYNLT1P63172 113 aa13.53□□□□□ -0.24
CCDC7-202ENST00000302316 GUCY2DQ02846 1103 aa13.53□□□□□ -0.24
CCDC7-202ENST00000302316 KRT17Q04695 432 aa13.53□□□□□ -0.24
CCDC7-202ENST00000302316 DHX34Q14147 1143 aaKnown RBP13.53□□□□□ -0.24
CCDC7-202ENST00000302316 DPYSL3Q14195 570 aa13.53□□□□□ -0.24
CCDC7-202ENST00000302316 PDK2Q15119 407 aa13.53□□□□□ -0.24
CCDC7-202ENST00000302316 TAZQ16635 292 aa13.53□□□□□ -0.24
CCDC7-202ENST00000302316 CA9Q16790 459 aa13.53□□□□□ -0.24
CCDC7-202ENST00000302316 BTBD8Q5XKL5 378 aa13.53□□□□□ -0.24
CCDC7-202ENST00000302316 TTC27Q6P3X3 843 aa13.53□□□□□ -0.24
CCDC7-202ENST00000302316 MAP7D3Q8IWC1 876 aa13.53□□□□□ -0.24
CCDC7-202ENST00000302316 CCDC105Q8IYK2 499 aa13.53□□□□□ -0.24
CCDC7-202ENST00000302316 RUNDC3BQ96NL0 473 aa13.53□□□□□ -0.24
CCDC7-202ENST00000302316 RAD9AQ99638 391 aa13.53□□□□□ -0.24
CCDC7-202ENST00000302316 DCLK3Q9C098 648 aa13.53□□□□□ -0.24
CCDC7-202ENST00000302316 LRRC19Q9H756 370 aa13.53□□□□□ -0.24
CCDC7-202ENST00000302316 ABCC13Q9NSE7 274 aa13.53□□□□□ -0.24
CCDC7-202ENST00000302316 PIGVQ9NUD9 493 aa13.53□□□□□ -0.24
CCDC7-202ENST00000302316 SCML2Q9UQR0 700 aa13.53□□□□□ -0.24
CCDC7-202ENST00000302316 COL4A4P53420 1690 aaPredicted RBP13.53□□□□□ -0.24
CCDC7-202ENST00000302316 ZSCAN5CA6NGD5 496 aaPredicted RBP13.52□□□□□ -0.24
CCDC7-202ENST00000302316 LINC00271P0C7V0 271 aa13.52□□□□□ -0.24
CCDC7-202ENST00000302316 ARSEP51690 589 aa13.52□□□□□ -0.24
CCDC7-202ENST00000302316 USP46P62068 366 aa13.52□□□□□ -0.24
CCDC7-202ENST00000302316 SNX1Q13596 522 aa13.52□□□□□ -0.24
CCDC7-202ENST00000302316 BRD3Q15059 726 aa13.52□□□□□ -0.24
CCDC7-202ENST00000302316 PPP6R3Q5H9R7 873 aaPredicted RBP13.52□□□□□ -0.24
CCDC7-202ENST00000302316 RFX6Q8HWS3 928 aa13.52□□□□□ -0.24
CCDC7-202ENST00000302316 PHOSPHO2Q8TCD6 241 aa13.52□□□□□ -0.24
CCDC7-202ENST00000302316 AUTS2Q8WXX7 1259 aa13.52□□□□□ -0.24
CCDC7-202ENST00000302316 DPF3Q92784 378 aa13.52□□□□□ -0.24
CCDC7-202ENST00000302316 CLP1Q92989 425 aaKnown RBP13.52□□□□□ -0.24
CCDC7-202ENST00000302316 SPATA17Q96L03 361 aa13.52□□□□□ -0.24
CCDC7-202ENST00000302316 FAM118BQ9BPY3 351 aa13.52□□□□□ -0.24
CCDC7-202ENST00000302316 DHX35Q9H5Z1 703 aaKnown RBP13.52□□□□□ -0.24
CCDC7-202ENST00000302316 PCDH18Q9HCL0 1135 aa13.52□□□□□ -0.24
CCDC7-202ENST00000302316 MRPL17Q9NRX2 175 aaKnown RBP13.52□□□□□ -0.24
CCDC7-202ENST00000302316 HOMER3Q9NSC5 361 aa13.52□□□□□ -0.24
CCDC7-202ENST00000302316 STK39Q9UEW8 545 aa13.52□□□□□ -0.24
CCDC7-202ENST00000302316 AFF4Q9UHB7 1163 aaKnown RBP13.52□□□□□ -0.24
CCDC7-202ENST00000302316 EFR3BQ9Y2G0 817 aa13.52□□□□□ -0.24
CCDC7-202ENST00000302316 A0A1W2PQH9 124 aa13.52□□□□□ -0.25
CCDC7-202ENST00000302316 CCDC151A5D8V7 595 aa13.52□□□□□ -0.25
CCDC7-202ENST00000302316 CST8O60676 142 aa13.52□□□□□ -0.25
CCDC7-202ENST00000302316 RTN3O95197 1032 aaPredicted RBP13.52□□□□□ -0.25
CCDC7-202ENST00000302316 CA8P35219 290 aa13.52□□□□□ -0.25
CCDC7-202ENST00000302316 CLCN6P51797 869 aa13.52□□□□□ -0.25
CCDC7-202ENST00000302316 MMRN1Q13201 1228 aa13.52□□□□□ -0.25
CCDC7-202ENST00000302316 DPYSL2Q16555 572 aa13.52□□□□□ -0.25
CCDC7-202ENST00000302316 BEND5Q7L4P6 421 aa13.52□□□□□ -0.25
CCDC7-202ENST00000302316 SCD5Q86SK9 330 aa13.52□□□□□ -0.25
CCDC7-202ENST00000302316 TAC4Q86UU9 113 aa13.52□□□□□ -0.25
CCDC7-202ENST00000302316 DQX1Q8TE96 717 aaKnown RBP13.52□□□□□ -0.25
CCDC7-202ENST00000302316 FBXO32Q969P5 355 aa13.52□□□□□ -0.25
CCDC7-202ENST00000302316 HAUS1Q96CS2 278 aa13.52□□□□□ -0.25
CCDC7-202ENST00000302316 PGAP3Q96FM1 320 aaPredicted RBP13.52□□□□□ -0.25
CCDC7-202ENST00000302316 MAK16Q9BXY0 300 aaKnown RBP13.52□□□□□ -0.25
CCDC7-202ENST00000302316 EPB41L5Q9HCM4 733 aa13.52□□□□□ -0.25
CCDC7-202ENST00000302316 PCYOX1Q9UHG3 505 aa13.52□□□□□ -0.25
CCDC7-202ENST00000302316 FZD10Q9ULW2 581 aa13.52□□□□□ -0.25
CCDC7-202ENST00000302316 PLXNA3P51805 1871 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 ESYT3A0FGR9 886 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 LCHNA4D1U4 455 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 ERLIN1O75477 346 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 ATF6P18850 670 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 YWHAQP27348 245 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 KCNJ1P48048 391 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 TUFMP49411 452 aaKnown RBP13.51□□□□□ -0.25
CCDC7-202ENST00000302316 CCNG2Q16589 344 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 KCTD19Q17RG1 926 aaPredicted RBP13.51□□□□□ -0.25
CCDC7-202ENST00000302316 TPGS2Q68CL5 300 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 BBS12Q6ZW61 710 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 SND1Q7KZF4 910 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCDC7-202ENST00000302316 MON1AQ86VX9 555 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 JAMLQ86YT9 394 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 IFT20Q8IY31 132 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 ARHGAP18Q8N392 663 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 ZNF461Q8TAF7 563 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 SP7Q8TDD2 431 aaPredicted RBP13.51□□□□□ -0.25
CCDC7-202ENST00000302316 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.51□□□□□ -0.25
CCDC7-202ENST00000302316 GIPC2Q8TF65 315 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 ZNF670Q9BS34 389 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 TRIM51Q9BSJ1 452 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 ZBP1Q9H171 429 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 NMUR1Q9HB89 426 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 WDR6Q9NNW5 1121 aaKnown RBP13.51□□□□□ -0.25
CCDC7-202ENST00000302316 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCDC7-202ENST00000302316 GMIPQ9P107 970 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 RASAL2Q9UJF2 1139 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 FAM187AA6NFU0 413 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 ECEL1O95672 775 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 F9P00740 461 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 L1CAMP32004 1257 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 PGFP49763 221 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 MTMR3Q13615 1198 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 EFHC2Q5JST6 749 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 GSPT2Q8IYD1 628 aaKnown RBP13.51□□□□□ -0.25
CCDC7-202ENST00000302316 KLHL23Q8NBE8 558 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 RNF139Q8WU17 664 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms