RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 ZNF398Q8TD17 642 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 PRMT7Q9NVM4 692 aaPredicted RBP16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 FGFR2P21802 821 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 AVPR1AP37288 418 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 BACE1P56817 501 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 ARRDC4Q8NCT1 418 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 MRIQ9BWK5 157 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 ATAD3AQ9NVI7 634 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 TUBGCP4Q9UGJ1 667 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 RRN3P2A6NIE6 340 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 MAP3K6O95382 1288 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 C6orf222P0C671 652 aaPredicted RBP16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 ITGA9Q13797 1035 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 DCAF4L1Q3SXM0 396 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 ARMCX4Q5H9R4 360 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 WDR60Q8WVS4 1066 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 SHBGP04278 402 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 MPP3Q13368 585 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 CCDC153Q494R4 210 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 WDR59Q6PJI9 974 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 HES6Q96HZ4 224 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 ZFYVE19Q96K21 471 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 KIAA1257Q9ULG3 409 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 USP18Q9UMW8 372 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 SORCS3Q9UPU3 1222 aa16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 EIF3LQ9Y262 564 aaKnown RBP16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.95■□□□□ 0.3
SNAPC4-201ENST00000298532 RBP1P09455 135 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 BMP6P22004 513 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 GEMP55040 296 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 C15orf52Q6ZUT6 534 aaKnown RBP16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 DCUN1D1Q96GG9 259 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 SPATA17Q96L03 361 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 LRMDAQ9H2I8 198 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 CHST12Q9NRB3 414 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 VTI1BQ9UEU0 232 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 SMIM31A0A1B0GVY4 71 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 SPDYE5A6NIY4 337 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 NR5A2O00482 541 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 PRPF4O43172 522 aaKnown RBP eCLIP16.94■□□□□ 0.36e-7■□□□□ 10.7
SNAPC4-201ENST00000298532 WBP4O75554 376 aaKnown RBP16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 PRKCIP41743 596 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 CHN2P52757 468 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 DRG2P55039 364 aaKnown RBP16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 DGKDQ16760 1214 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 SPDYE7PQ495Y7 208 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 MARK2Q7KZI7 788 aaKnown RBP16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 NET1Q7Z628 596 aaPredicted RBP16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 ABRAQ8N0Z2 381 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 MTERF3Q96E29 417 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 PNMA5Q96PV4 448 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 VPS9D1Q9Y2B5 631 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 LIN7AO14910 233 aaPredicted RBP16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 DYNC1LI2O43237 492 aaPredicted RBP16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 CACNB2Q08289 660 aaPredicted RBP16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 HEATR4Q86WZ0 1026 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 ETNPPLQ8TBG4 499 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 SH3KBP1Q96B97 665 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 GLT1D1Q96MS3 346 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 IARS2Q9NSE4 1012 aaKnown RBP16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 TRIM24O15164 1050 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 VDRP11473 427 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 ATP6V1B2P21281 511 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 SKIV2L2P42285 1042 aaKnown RBP16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 Q4G0T1 1027 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 OSCP1Q8WVF1 389 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 PHF21AQ96BD5 680 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 VCPIP1Q96JH7 1222 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 CYLDQ9NQC7 956 aa16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 PIN4Q9Y237 131 aaKnown RBP16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 MED1Q15648 1581 aaPredicted RBP16.94■□□□□ 0.3
SNAPC4-201ENST00000298532 PHGDHO43175 533 aaKnown RBP16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 DHFR2Q86XF0 187 aa16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 DLG3Q92796 817 aa16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 GRIP2Q9C0E4 1043 aa16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 PARVBQ9HBI1 364 aa16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 DMAP1Q9NPF5 467 aaPredicted RBP16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 AVENQ9NQS1 362 aaPredicted RBP16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 CTNNAL1Q9UBT7 734 aa16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 AAR2Q9Y312 384 aaKnown RBP16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 TRIM13O60858 407 aa16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 PROCP04070 461 aa16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 MPOP05164 745 aa16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 KCTD21Q4G0X4 260 aa16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 CACHD1Q5VU97 1274 aa16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 PTRHD1Q6GMV3 140 aaKnown RBP16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 SV2AQ7L0J3 742 aa16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 CENPLQ8N0S6 344 aaPredicted RBP16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 FAM210AQ96ND0 272 aa16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 UTP6Q9NYH9 597 aaKnown RBP16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 CROTQ9UKG9 612 aa16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 OGTO15294 1046 aa16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 GSNP06396 782 aa16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 PRKAA2P54646 552 aa16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 NCKAP1LP55160 1127 aa16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 CYP24A1Q07973 514 aa16.93■□□□□ 0.3
SNAPC4-201ENST00000298532 MRNIPQ6NTE8 343 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms