RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 EEF1DP3Q658K8 133 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 SAMD3Q8N6K7 520 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 OR6J1Q8NGC5 347 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 SLC7A14Q8TBB6 771 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 UBP1Q9NZI7 540 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 TSR3Q9UJK0 312 aaKnown RBP12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 NWD2Q9ULI1 1742 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 LACTBL1A8MY62 500 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 PTGER2P43116 358 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 ABCG1P45844 678 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 SLC34A1Q06495 639 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 BOLA3Q53S33 107 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 ZC3H12BQ5HYM0 836 aaKnown RBP12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 FSD1LQ9BXM9 530 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 SPATC1LQ9H0A9 340 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 MYH7P12883 1935 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 C16orf96A6NNT2 1141 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 CSPG5O95196 566 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 ETS2P15036 469 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 RBL1P28749 1068 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 RPL22P35268 128 aaKnown RBP12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 CCNHP51946 323 aaPredicted RBP12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 TPI1P60174 286 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 ACCSLQ4AC99 568 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 METTL7BQ6UX53 244 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 CYP4X1Q8N118 509 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 OR6P1Q8NGX9 317 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 DDI1Q8WTU0 396 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 RNF139Q8WU17 664 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 AFG1LQ8WV93 481 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 CLEC4DQ8WXI8 215 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 CENPTQ96BT3 561 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 MFSD14AQ96MC6 490 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 NR1H4Q96RI1 486 aaPredicted RBP12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 ZBTB18Q99592 522 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 COQ7Q99807 217 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 CNPY3Q9BT09 278 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 RUBCNLQ9H714 662 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 C1orf232A0A0U1RR37 186 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 IQCA1LA6NCM1 817 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 MICAL2O94851 1124 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 FKBP1AP62942 108 aaKnown RBP12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 INPP5AQ14642 412 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 C6orf10Q5SRN2 563 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 CCDC81Q6ZN84 652 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 LPCAT2Q7L5N7 544 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 APPL2Q8NEU8 664 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 CNDP1Q96KN2 507 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 ZDHHC18Q9NUE0 388 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 TMEM59LQ9UK28 342 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 SNX13Q9Y5W8 968 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 RPS6KL1Q9Y6S9 549 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 AP3B1O00203 1094 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 TPD52L2O43399 206 aaKnown RBP12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 NFICP08651 508 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 GNL1P36915 607 aaPredicted RBP12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 NSUN2Q08J23 767 aaKnown RBP eCLIP12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 PAN2Q504Q3 1202 aaKnown RBP12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 IRGCQ6NXR0 463 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 POU5F2Q8N7G0 328 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 VCPIP1Q96JH7 1222 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 UBAP1Q9NZ09 502 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 EDIL3O43854 480 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 LSM8O95777 96 aaKnown RBP12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 PEX5P50542 639 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 RASA2Q15283 850 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 MTFR1Q15390 333 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 C16orf46Q6P387 395 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 LRRC74BQ6ZQY2 392 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 UTS2BQ765I0 119 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 METTL23Q86XA0 190 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 OMA1Q96E52 524 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 RNPEPL1Q9HAU8 725 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 SLC24A2Q9UI40 661 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 HES2Q9Y543 173 aa12.94□□□□□ -0.34
SLC6A1-201ENST00000287766 ASB14A6NK59 587 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 USP12O75317 370 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 ENTPD5O75356 428 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 HMGCRP04035 888 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 VDRP11473 427 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 KDELR1P24390 212 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 NRLP54845 237 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 MROH7Q68CQ1 1323 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 LRRC8BQ6P9F7 803 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 FAM43BQ6ZT52 329 aaPredicted RBP12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 UNC45BQ8IWX7 931 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 FAM81AQ8TBF8 368 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 ADAM32Q8TC27 787 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 ZBED2Q9BTP6 218 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 ZNF518BQ9C0D4 1074 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 CRYBG1Q9Y4K1 1723 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 M0QYT0 321 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 ANGPT2O15123 496 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 AHCYL1O43865 530 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 AKAP5P24588 427 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 DMC1Q14565 340 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 SLC26A11Q86WA9 606 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 C12orf29Q8N999 325 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 KIF17Q9P2E2 1029 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms