RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 C1orf146Q5VVC0 180 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.16□□□□□ -0.14
NPC1-201ENST00000269228 LGI2Q8N0V4 545 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 ATP13A1Q9HD20 1204 aa14.16□□□□□ -0.14
NPC1-201ENST00000269228 SRP72O76094 671 aaKnown RBP14.15□□□□□ -0.14
NPC1-201ENST00000269228 RETSATQ6NUM9 610 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 SNX31Q8N9S9 440 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 TKTL2Q9H0I9 626 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 IGLV3-22A0A075B6J6 115 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.15□□□□□ -0.14
NPC1-201ENST00000269228 NPR3P17342 541 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 TRADDQ15628 312 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 KCNA10Q16322 511 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 RIBC1Q8N443 379 aaPredicted RBP14.15□□□□□ -0.14
NPC1-201ENST00000269228 FAM136AQ96C01 138 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 FGFBP2Q9BYJ0 223 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 RBPJLQ9UBG7 517 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 ZNF214Q9UL59 606 aaPredicted RBP14.15□□□□□ -0.14
NPC1-201ENST00000269228 VPS9D1Q9Y2B5 631 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 PHF20L1A8MW92 1017 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 ADCY6O43306 1168 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 YBX3P16989 372 aaKnown RBP eCLIP14.15□□□□□ -0.143e-6■■■■□ 19.7
NPC1-201ENST00000269228 NOL9Q5SY16 702 aaKnown RBP14.15□□□□□ -0.14
NPC1-201ENST00000269228 B3GALNT2Q8NCR0 500 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 UXTQ9UBK9 157 aaPredicted RBP14.15□□□□□ -0.14
NPC1-201ENST00000269228 IPPQ9Y573 584 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 PCDHA3Q9Y5H8 950 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 COL1A2P08123 1366 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 KCNK1O00180 336 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 RNASEH1O60930 286 aaKnown RBP14.15□□□□□ -0.14
NPC1-201ENST00000269228 DARSP14868 501 aaKnown RBP14.15□□□□□ -0.14
NPC1-201ENST00000269228 C15orf59Q2T9L4 293 aaPredicted RBP14.15□□□□□ -0.14
NPC1-201ENST00000269228 ILDR2Q71H61 639 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 NT5DC3Q86UY8 548 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 CCNJLQ8IV13 435 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 ARMC2Q8NEN0 867 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 BSNDQ8WZ55 320 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 C12orf42Q96LP6 360 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 XPO6Q96QU8 1125 aaKnown RBP14.15□□□□□ -0.14
NPC1-201ENST00000269228 TLR10Q9BXR5 811 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 IARS2Q9NSE4 1012 aaKnown RBP14.15□□□□□ -0.14
NPC1-201ENST00000269228 MARCH2Q9P0N8 246 aa14.15□□□□□ -0.14
NPC1-201ENST00000269228 TRMT6Q9UJA5 497 aaKnown RBP14.15□□□□□ -0.14
NPC1-201ENST00000269228 NT5C1B-RDH14C9J2C7 533 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 DUSP11O75319 330 aaKnown RBP14.14□□□□□ -0.15
NPC1-201ENST00000269228 E2F6O75461 281 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 SMPD1P17405 629 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 IFNA8P32881 189 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 PRKCIP41743 596 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 CUL3Q13618 768 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 PTK2BQ14289 1009 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 PIGZQ86VD9 579 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 FAM71AQ8IYT1 594 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 TBC1D19Q8N5T2 526 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 DCLK3Q9C098 648 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 GANQ9H2C0 597 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 VANGL2Q9ULK5 521 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 ATRNL1Q5VV63 1379 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 MIPOL1Q8TD10 442 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 EPS8L3Q8TE67 593 aaKnown RBP14.14□□□□□ -0.15
NPC1-201ENST00000269228 ZBTB10Q96DT7 871 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 TMA16Q96EY4 203 aaKnown RBP14.14□□□□□ -0.15
NPC1-201ENST00000269228 FAM161BQ96MY7 647 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 HIPK3Q9H422 1215 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 CDH9Q9ULB4 789 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 GIT1Q9Y2X7 761 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 RPSAP08865 295 aaKnown RBP14.14□□□□□ -0.15
NPC1-201ENST00000269228 FAM83EQ2M2I3 478 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 SLC26A7Q8TE54 656 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 ADGRA2Q96PE1 1338 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 ICAM3P32942 547 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 KDSRQ06136 332 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 SHC3Q92529 594 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 NAT9Q9BTE0 207 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 ABCC13Q9NSE7 274 aa14.14□□□□□ -0.15
NPC1-201ENST00000269228 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.14□□□□□ -0.15
NPC1-201ENST00000269228 SERPINF2P08697 491 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 CTNNB1P35222 781 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 SGO1Q5FBB7 561 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 FIBCD1Q8N539 461 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 FAM208AQ9UK61 1670 aaKnown RBP14.13□□□□□ -0.15
NPC1-201ENST00000269228 A0A0B4J269 797 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 RARGP13631 454 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 NOS2P35228 1153 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 BRCC3P46736 316 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 RRP1BQ14684 758 aaKnown RBP14.13□□□□□ -0.15
NPC1-201ENST00000269228 MAPRE2Q15555 327 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 REM2Q8IYK8 340 aaPredicted RBP14.13□□□□□ -0.15
NPC1-201ENST00000269228 BRI3BPQ8WY22 251 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 WNT8BQ93098 351 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 SERPINB12Q96P63 405 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 CDC42EP4Q9H3Q1 356 aaKnown RBP14.13□□□□□ -0.15
NPC1-201ENST00000269228 PKD2L2Q9NZM6 624 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 ARL2BPQ9Y2Y0 163 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 SCAMP3O14828 347 aaKnown RBP14.13□□□□□ -0.15
NPC1-201ENST00000269228 PJA2O43164 708 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 RARAP10276 462 aa14.13□□□□□ -0.15
NPC1-201ENST00000269228 RPL9P32969 192 aaKnown RBP14.13□□□□□ -0.15
NPC1-201ENST00000269228 RFC1P35251 1148 aaPredicted RBP14.13□□□□□ -0.15
NPC1-201ENST00000269228 TTLL9Q3SXZ7 439 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms