RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 FKBP9P1Q75LS8 142 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 LRRC8DQ7L1W4 858 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 ZNF720Q7Z2F6 126 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 FAM9CQ8IZT9 166 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 HIPK4Q8NE63 616 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 PIP4K2CQ8TBX8 421 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 ARNTL2Q8WYA1 636 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 TGS1Q96RS0 853 aaKnown RBP13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 ST3GAL5Q9UNP4 418 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 CHGBP05060 677 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 GRAMD1BQ3KR37 738 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 TMEM259Q4ZIN3 620 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 ERMARDQ5T6L9 678 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 FBXW10Q5XX13 1052 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 ZFPM1Q8IX07 1006 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 ZNF614Q8N883 585 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 PPTC7Q8NI37 304 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 REPS1Q96D71 796 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 RBM15Q96T37 977 aaKnown RBP eCLIP13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 PARD6BQ9BYG5 372 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 WWP1Q9H0M0 922 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 TSPAN16Q9UKR8 245 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 GPSM3Q9Y4H4 160 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 REREQ9P2R6 1566 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 CDH8P55286 799 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 MARSP56192 900 aaKnown RBP13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 MRPS25P82663 173 aaKnown RBP13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 PTK7Q13308 1070 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 DDX39BQ13838 428 aaKnown RBP13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 MYBPC2Q14324 1141 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 ARID5BQ14865 1188 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 CDH9Q9ULB4 789 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 CRYL1Q9Y2S2 319 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 TRPC1P48995 793 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 ARMC12Q5T9G4 340 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 CEP70Q8NHQ1 597 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 RBBP8Q99708 897 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 EPC1Q9H2F5 836 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 FAF1Q9UNN5 650 aaPredicted RBP13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 PLA2G6O60733 806 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 MICAL2O94851 1124 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 PRIM2P49643 509 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 BLVRAP53004 296 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 CUL3Q13618 768 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 KCNA10Q16322 511 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 LENG9Q96B70 501 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 MED8Q96G25 268 aa13.99□□□□□ -0.17
PDGFRB-201ENST00000261799 RNF103-CHMP3A0A140T963 221 aa13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 FSTL1Q12841 308 aa13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 TOMM20Q15388 145 aa13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 GJB7Q6PEY0 223 aa13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 TFAP2DQ7Z6R9 452 aa13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 HORMAD1Q86X24 394 aa13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 FAM131BQ86XD5 332 aa13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 CXorf40BQ96DE9 158 aa13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 C2orf49Q9BVC5 232 aaPredicted RBP13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 TRABDQ9H4I3 376 aa13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 INTS13Q9NVM9 706 aa13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 MARCH2Q9P0N8 246 aa13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 POLR1AO95602 1720 aaPredicted RBP13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 SMG5Q9UPR3 1016 aaKnown RBP13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 DAB2P98082 770 aa13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 INSCQ1MX18 579 aa13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 OTOP2Q7RTS6 562 aa13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 BBS7Q8IWZ6 715 aa13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 HJURPQ8NCD3 748 aaPredicted RBP13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 SMG7Q92540 1137 aaKnown RBP13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 RUBCNQ92622 972 aa13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 C18orf25Q96B23 403 aaPredicted RBP13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 LRRC40Q9H9A6 602 aa13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 GTF3C4Q9UKN8 822 aa13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 MYO1GB0I1T2 1018 aa13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 CCDC60Q8IWA6 550 aaPredicted RBP13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 POP1Q99575 1024 aaKnown RBP13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 ELAC2Q9BQ52 826 aaKnown RBP13.98□□□□□ -0.17
PDGFRB-201ENST00000261799 OR6C75A6NL08 312 aa13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 NUMBP49757 651 aa13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 C1orf146Q5VVC0 180 aa13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 SLC2A14Q8TDB8 520 aa13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 UPF1Q92900 1129 aaKnown RBP eCLIP13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 CERS4Q9HA82 394 aa13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 GPATCH2LQ9NWQ4 482 aa13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 NCF1BA6NI72 391 aaPredicted RBP13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 NCF1CA8MVU1 366 aaPredicted RBP13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 ZNF500O60304 480 aaPredicted RBP13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 MMP3P08254 477 aa13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 NCF1P14598 390 aaPredicted RBP13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 SMARCB1Q12824 385 aa13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 STX3Q13277 289 aa13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 CCDC126Q96EE4 140 aa13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 GID8Q9NWU2 228 aa13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 TBL1XO60907 577 aa13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 CCDC130P13994 396 aa13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 ZSCAN26Q16670 478 aa13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 PIK3R5Q8WYR1 880 aa13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 OR8D1Q8WZ84 308 aa13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 MRPL1Q9BYD6 325 aaKnown RBP13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 KCTD10Q9H3F6 313 aa13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 ABCB6Q9NP58 842 aa13.97□□□□□ -0.17
PDGFRB-201ENST00000261799 SNRPAP09012 282 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms