RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 DDX1Q92499 740 aaKnown RBP17.56■□□□□ 0.4
SDCBP-201ENST00000260130 PBXIP1Q96AQ6 731 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 ZFRQ96KR1 1074 aaKnown RBP17.56■□□□□ 0.4
SDCBP-201ENST00000260130 BAG1Q99933 345 aaPredicted RBP17.56■□□□□ 0.4
SDCBP-201ENST00000260130 FAM83CQ9BQN1 747 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 MIS12Q9H081 205 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 ARGLU1Q9NWB6 273 aaPredicted RBP17.56■□□□□ 0.4
SDCBP-201ENST00000260130 DNMT3LQ9UJW3 386 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 CEP83Q9Y592 693 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 PDCLQ13371 301 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 TAF3Q5VWG9 929 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 BSPRYQ5W0U4 402 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 BTBD8Q5XKL5 378 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 ZNF677Q86XU0 584 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 TMEM139Q8IV31 216 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 CSGALNACT1Q8TDX6 532 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 UBXN4Q92575 508 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 NOX5Q96PH1 765 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 HEBP1Q9NRV9 189 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 PPP2R2CQ9Y2T4 447 aa17.56■□□□□ 0.4
SDCBP-201ENST00000260130 PDGFBP01127 241 aaPredicted RBP17.55■□□□□ 0.4
SDCBP-201ENST00000260130 HFE2Q6ZVN8 426 aa17.55■□□□□ 0.4
SDCBP-201ENST00000260130 ZNF771Q7L3S4 317 aaPredicted RBP17.55■□□□□ 0.4
SDCBP-201ENST00000260130 KIAA1958Q8N8K9 716 aa17.55■□□□□ 0.4
SDCBP-201ENST00000260130 CLEC4CQ8WTT0 213 aa17.55■□□□□ 0.4
SDCBP-201ENST00000260130 OSCP1Q8WVF1 389 aa17.55■□□□□ 0.4
SDCBP-201ENST00000260130 SHDQ96IW2 340 aa17.55■□□□□ 0.4
SDCBP-201ENST00000260130 MFSD1Q9H3U5 465 aa17.55■□□□□ 0.4
SDCBP-201ENST00000260130 ABCC13Q9NSE7 274 aa17.55■□□□□ 0.4
SDCBP-201ENST00000260130 DUS2Q9NX74 493 aaKnown RBP17.55■□□□□ 0.4
SDCBP-201ENST00000260130 CFAP97Q9P2B7 532 aa17.55■□□□□ 0.4
SDCBP-201ENST00000260130 NOCTQ9UK39 431 aaKnown RBP17.55■□□□□ 0.4
SDCBP-201ENST00000260130 E5RJQ4 531 aa17.55■□□□□ 0.4
SDCBP-201ENST00000260130 URI1O94763 535 aaPredicted RBP17.55■□□□□ 0.4
SDCBP-201ENST00000260130 FAM193AP78312 1265 aa17.55■□□□□ 0.4
SDCBP-201ENST00000260130 PRKCQQ04759 706 aa17.55■□□□□ 0.4
SDCBP-201ENST00000260130 TNK2Q07912 1038 aa17.55■□□□□ 0.4
SDCBP-201ENST00000260130 PDGFRLQ15198 375 aa17.55■□□□□ 0.4
SDCBP-201ENST00000260130 MLF2Q15773 248 aaPredicted RBP17.55■□□□□ 0.4
SDCBP-201ENST00000260130 RSRC2Q7L4I2 434 aaKnown RBP17.55■□□□□ 0.4
SDCBP-201ENST00000260130 TMEM35BQ8NCS4 154 aa17.55■□□□□ 0.4
SDCBP-201ENST00000260130 C1orf131Q8NDD1 294 aaKnown RBP17.55■□□□□ 0.4
SDCBP-201ENST00000260130 KLF16Q9BXK1 252 aaPredicted RBP17.55■□□□□ 0.4
SDCBP-201ENST00000260130 GTSE1Q9NYZ3 720 aa17.55■□□□□ 0.4
SDCBP-201ENST00000260130 MYO6Q9UM54 1294 aa17.55■□□□□ 0.4
SDCBP-201ENST00000260130 MDM4O15151 490 aa17.54■□□□□ 0.4
SDCBP-201ENST00000260130 MMEP08473 750 aa17.54■□□□□ 0.4
SDCBP-201ENST00000260130 CDH5P33151 784 aaPredicted RBP17.54■□□□□ 0.4
SDCBP-201ENST00000260130 PBX1P40424 430 aa17.54■□□□□ 0.4
SDCBP-201ENST00000260130 TRIM68Q6AZZ1 485 aa17.54■□□□□ 0.4
SDCBP-201ENST00000260130 CPXM1Q96SM3 734 aa17.54■□□□□ 0.4
SDCBP-201ENST00000260130 LRFN3Q9BTN0 628 aa17.54■□□□□ 0.4
SDCBP-201ENST00000260130 EBF3Q9H4W6 596 aa17.54■□□□□ 0.4
SDCBP-201ENST00000260130 WNT6Q9Y6F9 365 aa17.54■□□□□ 0.4
SDCBP-201ENST00000260130 E2F8A0AVK6 867 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 EFCAB8A8MWE9 144 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 PAPSS1O43252 624 aaPredicted RBP17.53■□□□□ 0.4
SDCBP-201ENST00000260130 SART1O43290 800 aaKnown RBP17.53■□□□□ 0.4
SDCBP-201ENST00000260130 IFNAR2P48551 515 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 MLLT6P55198 1093 aaPredicted RBP17.53■□□□□ 0.4
SDCBP-201ENST00000260130 SNX16P57768 344 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 STARD6P59095 220 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 CDR2Q01850 454 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 ARID5AQ03989 594 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 EFEMP1Q12805 493 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 RUNX3Q13761 415 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 MIB1Q86YT6 1006 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 RNF139Q8WU17 664 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 SLC20A1Q8WUM9 679 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 BAP1Q92560 729 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 EDEM1Q92611 657 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 GOLGA1Q92805 767 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 OLA1Q9NTK5 396 aaKnown RBP17.53■□□□□ 0.4
SDCBP-201ENST00000260130 ZNF446Q9NWS9 450 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 SH3BP1Q9Y3L3 701 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 STK25O00506 426 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 LSM8O95777 96 aaKnown RBP17.53■□□□□ 0.4
SDCBP-201ENST00000260130 LTFP02788 710 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 CCDC172P0C7W6 258 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 GLULP15104 373 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 KPNA1P52294 538 aaPredicted RBP17.53■□□□□ 0.4
SDCBP-201ENST00000260130 GOLGA8FQ08AF8 430 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 GOLGA8DPQ0D2H9 430 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 ITPRIPL2Q3MIP1 535 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 FIGNQ5HY92 759 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 FMNL3Q8IVF7 1028 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 NUP58Q9BVL2 599 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 EDEM3Q9BZQ6 932 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 LINC00597Q9H2U6 94 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 HPS4Q9NQG7 708 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 TJP2Q9UDY2 1190 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 RASAL2Q9UJF2 1139 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 PIAS3Q9Y6X2 628 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 MYO16Q9Y6X6 1858 aa17.53■□□□□ 0.4
SDCBP-201ENST00000260130 SLC9A3R1O14745 358 aaPredicted RBP17.52■□□□□ 0.4
SDCBP-201ENST00000260130 IRF1P10914 325 aa17.52■□□□□ 0.4
SDCBP-201ENST00000260130 ARSAP15289 507 aa17.52■□□□□ 0.4
SDCBP-201ENST00000260130 FERP16591 822 aa17.52■□□□□ 0.4
SDCBP-201ENST00000260130 CASQ1P31415 396 aa17.52■□□□□ 0.4
SDCBP-201ENST00000260130 CLCN6P51797 869 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms