RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 LRTOMTQ8WZ04 291 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 SPSB4Q96A44 273 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 RSPRY1Q96DX4 576 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 ZNF778Q96MU6 729 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 PSMD1Q99460 953 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 C17orf80Q9BSJ5 609 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 KRTAP1-5Q9BYS1 174 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 TRIM5Q9C035 493 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 GBA2Q9HCG7 927 aaPredicted RBP5.86□□□□□ -1.47
TRA2B-201ENST00000259043 TRMT13Q9NUP7 481 aaKnown RBP5.86□□□□□ -1.47
TRA2B-201ENST00000259043 COL20A1Q9P218 1284 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 CDY1Q9Y6F8 540 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 VSTM5A8MXK1 200 aa5.85□□□□□ -1.47
TRA2B-201ENST00000259043 ADAMTS3O15072 1205 aa5.85□□□□□ -1.47
TRA2B-201ENST00000259043 PLIN1O60240 522 aa5.85□□□□□ -1.47
TRA2B-201ENST00000259043 MAP4K4O95819 1239 aaPredicted RBP5.85□□□□□ -1.47
TRA2B-201ENST00000259043 BRAFP15056 766 aa5.85□□□□□ -1.47
TRA2B-201ENST00000259043 KLRC1P26715 233 aa5.85□□□□□ -1.47
TRA2B-201ENST00000259043 CACNB3P54284 484 aa5.85□□□□□ -1.47
TRA2B-201ENST00000259043 PRKAG1P54619 331 aa5.85□□□□□ -1.47
TRA2B-201ENST00000259043 BCAT1P54687 386 aa5.85□□□□□ -1.47
TRA2B-201ENST00000259043 HOXA4Q00056 320 aaPredicted RBP5.85□□□□□ -1.47
TRA2B-201ENST00000259043 SLC44A4Q53GD3 710 aa5.85□□□□□ -1.47
TRA2B-201ENST00000259043 C3orf38Q5JPI3 329 aa5.85□□□□□ -1.47
TRA2B-201ENST00000259043 PRAMEF17Q5VTA0 474 aa5.85□□□□□ -1.47
TRA2B-201ENST00000259043 KIAA1614Q5VZ46 1190 aa5.85□□□□□ -1.47
TRA2B-201ENST00000259043 DPY19L3Q6ZPD9 716 aa5.85□□□□□ -1.47
TRA2B-201ENST00000259043 CYP2W1Q8TAV3 490 aa5.85□□□□□ -1.47
TRA2B-201ENST00000259043 APIPQ96GX9 242 aa5.85□□□□□ -1.47
TRA2B-201ENST00000259043 PRR25Q96S07 402 aa5.85□□□□□ -1.47
TRA2B-201ENST00000259043 SACM1LQ9NTJ5 587 aa5.85□□□□□ -1.47
TRA2B-201ENST00000259043 AFF4Q9UHB7 1163 aaKnown RBP5.85□□□□□ -1.47
TRA2B-201ENST00000259043 E9PCH4 1651 aa5.85□□□□□ -1.47
TRA2B-201ENST00000259043 ADGRL2O95490 1459 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 CCP110O43303 1012 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 PDE8BO95263 885 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 KRT18P05783 430 aaKnown RBP5.84□□□□□ -1.47
TRA2B-201ENST00000259043 IL1R1P14778 569 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 TUBA4AP68366 448 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 E2F1Q01094 437 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 GRM1Q13255 1194 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 CCNIQ14094 377 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 POLD3Q15054 466 aaPredicted RBP5.84□□□□□ -1.47
TRA2B-201ENST00000259043 NPY5RQ15761 445 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 GFOD2Q3B7J2 385 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 TBC1D25Q3MII6 688 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 RNASE12Q5GAN4 147 aaKnown RBP5.84□□□□□ -1.47
TRA2B-201ENST00000259043 CERCAMQ5T4B2 595 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 MTHFD1LQ6UB35 978 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 KIRREL2Q6UWL6 708 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 KCTD20Q7Z5Y7 419 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 SESTD1Q86VW0 696 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 CHSY1Q86X52 802 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 VGLL2Q8N8G2 317 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 ABHD11Q8NFV4 315 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 DNAJB14Q8TBM8 379 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 PPP1R9BQ96SB3 815 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 ZSCAN32Q9NX65 697 aa5.84□□□□□ -1.47
TRA2B-201ENST00000259043 RALGAPBQ86X10 1494 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 ANKRD30AQ9BXX3 1397 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 RGPD1P0DJD0 1748 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 PRRT4C9JH25 899 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 H7C1Q1 480 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 H7C4K7 107 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 SMIM22K7EJ46 135 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 PRKCBP05771 671 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 DLDP09622 509 aaKnown RBP5.83□□□□□ -1.48
TRA2B-201ENST00000259043 FPR3P25089 353 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 GNALP38405 381 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 RPS16P62249 146 aaKnown RBP5.83□□□□□ -1.48
TRA2B-201ENST00000259043 PSG6Q00889 435 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 TRIM72Q6ZMU5 477 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 CCDC149Q6ZUS6 474 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 C14orf80Q86SX3 495 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 TTC8Q8TAM2 541 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 CTHRC1Q96CG8 243 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 RITA1Q96K30 269 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 SEMA4CQ9C0C4 833 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 LRRC27Q9C0I9 530 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 OBP2AQ9NY56 170 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 SLIT2O94813 1529 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 PXDNQ92626 1479 aa5.83□□□□□ -1.48
TRA2B-201ENST00000259043 VPS8Q8N3P4 1428 aa5.82□□□□□ -1.48
TRA2B-201ENST00000259043 LOC102723971A0A1B0GUV8 181 aa5.82□□□□□ -1.48
TRA2B-201ENST00000259043 AP4M1O00189 453 aa5.82□□□□□ -1.48
TRA2B-201ENST00000259043 GOLIM4O00461 696 aa5.82□□□□□ -1.48
TRA2B-201ENST00000259043 CD3EAPO15446 510 aaKnown RBP5.82□□□□□ -1.48
TRA2B-201ENST00000259043 RRP9O43818 475 aaKnown RBP5.82□□□□□ -1.48
TRA2B-201ENST00000259043 GKP32189 559 aa5.82□□□□□ -1.48
TRA2B-201ENST00000259043 FAM193AP78312 1265 aa5.82□□□□□ -1.48
TRA2B-201ENST00000259043 TIAL1Q01085 375 aaKnown RBP eCLIP5.82□□□□□ -1.48
TRA2B-201ENST00000259043 INSCQ1MX18 579 aa5.82□□□□□ -1.48
TRA2B-201ENST00000259043 L1TD1Q5T7N2 865 aaKnown RBP5.82□□□□□ -1.48
TRA2B-201ENST00000259043 FCRL6Q6DN72 434 aa5.82□□□□□ -1.48
TRA2B-201ENST00000259043 SPARTQ8N0X7 666 aa5.82□□□□□ -1.48
TRA2B-201ENST00000259043 TERB1Q8NA31 727 aa5.82□□□□□ -1.48
TRA2B-201ENST00000259043 MSLNLQ96KJ4 702 aa5.82□□□□□ -1.48
TRA2B-201ENST00000259043 SNX18Q96RF0 628 aa5.82□□□□□ -1.48
TRA2B-201ENST00000259043 DPCDQ9BVM2 203 aaPredicted RBP5.82□□□□□ -1.48
TRA2B-201ENST00000259043 DHX36Q9H2U1 1008 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms