RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 SMC2O95347 1197 aa20■□□□□ 0.79
TM6SF1-201ENST00000258909 CAVIN2O95810 425 aa20■□□□□ 0.79
TM6SF1-201ENST00000258909 TYRP14679 529 aa20■□□□□ 0.79
TM6SF1-201ENST00000258909 STPG1Q5TH74 334 aa20■□□□□ 0.79
TM6SF1-201ENST00000258909 PMS2CLQ68D20 193 aa20■□□□□ 0.79
TM6SF1-201ENST00000258909 IL31Q6EBC2 164 aa20■□□□□ 0.79
TM6SF1-201ENST00000258909 GRAMD4Q6IC98 578 aa20■□□□□ 0.79
TM6SF1-201ENST00000258909 CCDC186Q7Z3E2 898 aa20■□□□□ 0.79
TM6SF1-201ENST00000258909 PGBD3Q8N328 593 aa20■□□□□ 0.79
TM6SF1-201ENST00000258909 ZNF513Q8N8E2 541 aaPredicted RBP20■□□□□ 0.79
TM6SF1-201ENST00000258909 TERB1Q8NA31 727 aa20■□□□□ 0.79
TM6SF1-201ENST00000258909 SMARCE1Q969G3 411 aa20■□□□□ 0.79
TM6SF1-201ENST00000258909 USP3Q9Y6I4 520 aa20■□□□□ 0.79
TM6SF1-201ENST00000258909 BCLAF3A2AJT9 711 aaKnown RBP19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 HMBSP08397 361 aa19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 PLA2G4AP47712 749 aa19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 FKBP3Q00688 224 aaKnown RBP19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 LRMPQ12912 555 aa19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 HSF5Q4G112 596 aaPredicted RBP19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 PIGZQ86VD9 579 aa19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 OLIG1Q8TAK6 271 aa19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 PLK2Q9NYY3 685 aa19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 RASAL2Q9UJF2 1139 aa19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 ACACBO00763 2458 aa19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 SLC16A3O15427 465 aaKnown RBP19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 STC2O76061 302 aa19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 DHPSP49366 369 aaPredicted RBP19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 NUCB2P80303 420 aa19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 EFEMP1Q12805 493 aa19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 COBLL1Q53SF7 1204 aa19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 KLHDC10Q6PID8 442 aa19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 TOGARAM2Q6ZUX3 1019 aa19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 ZC3H3Q8IXZ2 948 aaKnown RBP19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 TTC39CQ8N584 583 aa19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 SPATA20Q8TB22 786 aa19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 NDRG1Q92597 394 aaKnown RBP19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 P2RY11Q96G91 374 aa19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 ACOX2Q99424 681 aa19.99■□□□□ 0.79
TM6SF1-201ENST00000258909 CHD8Q9HCK8 2581 aa19.98■□□□□ 0.79
TM6SF1-201ENST00000258909 PRRT4C9JH25 899 aa19.98■□□□□ 0.79
TM6SF1-201ENST00000258909 TULP2O00295 520 aa19.98■□□□□ 0.79
TM6SF1-201ENST00000258909 KLKB1P03952 638 aa19.98■□□□□ 0.79
TM6SF1-201ENST00000258909 RALAP11233 206 aa19.98■□□□□ 0.79
TM6SF1-201ENST00000258909 PSEN1P49768 467 aa19.98■□□□□ 0.79
TM6SF1-201ENST00000258909 LIMK1P53667 647 aa19.98■□□□□ 0.79
TM6SF1-201ENST00000258909 CUL2Q13617 745 aa19.98■□□□□ 0.79
TM6SF1-201ENST00000258909 GOLGA7BQ2TAP0 167 aa19.98■□□□□ 0.79
TM6SF1-201ENST00000258909 PREPLQ4J6C6 727 aaPredicted RBP19.98■□□□□ 0.79
TM6SF1-201ENST00000258909 EGFLAMQ63HQ2 1017 aa19.98■□□□□ 0.79
TM6SF1-201ENST00000258909 ARHGAP17Q68EM7 881 aa19.98■□□□□ 0.79
TM6SF1-201ENST00000258909 Q6ZNB5 142 aa19.98■□□□□ 0.79
TM6SF1-201ENST00000258909 ARMCX6Q7L4S7 300 aa19.98■□□□□ 0.79
TM6SF1-201ENST00000258909 C11orf74Q86VG3 221 aa19.98■□□□□ 0.79
TM6SF1-201ENST00000258909 FAXDC2Q96IV6 333 aa19.98■□□□□ 0.79
TM6SF1-201ENST00000258909 XPO6Q96QU8 1125 aaKnown RBP19.98■□□□□ 0.79
TM6SF1-201ENST00000258909 MARK1Q9P0L2 795 aa19.98■□□□□ 0.79
TM6SF1-201ENST00000258909 WDR35Q9P2L0 1181 aa19.98■□□□□ 0.79
TM6SF1-201ENST00000258909 ARMCX3Q9UH62 379 aaPredicted RBP19.98■□□□□ 0.79
TM6SF1-201ENST00000258909 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.97■□□□□ 0.79
TM6SF1-201ENST00000258909 PATE3B3GLJ2 98 aa19.97■□□□□ 0.79
TM6SF1-201ENST00000258909 MAP3K13O43283 966 aa19.97■□□□□ 0.79
TM6SF1-201ENST00000258909 CACNG3O60359 315 aa19.97■□□□□ 0.79
TM6SF1-201ENST00000258909 P2RY2P41231 377 aa19.97■□□□□ 0.79
TM6SF1-201ENST00000258909 RNF43Q68DV7 783 aa19.97■□□□□ 0.79
TM6SF1-201ENST00000258909 NUDT18Q6ZVK8 323 aa19.97■□□□□ 0.79
TM6SF1-201ENST00000258909 TADA2BQ86TJ2 420 aa19.97■□□□□ 0.79
TM6SF1-201ENST00000258909 TMEFF1Q8IYR6 380 aa19.97■□□□□ 0.79
TM6SF1-201ENST00000258909 ANKRD52Q8NB46 1076 aa19.97■□□□□ 0.79
TM6SF1-201ENST00000258909 SLC35C1Q96A29 364 aa19.97■□□□□ 0.79
TM6SF1-201ENST00000258909 CLIC5Q9NZA1 410 aa19.97■□□□□ 0.79
TM6SF1-201ENST00000258909 MBD1Q9UIS9 605 aaPredicted RBP19.97■□□□□ 0.79
TM6SF1-201ENST00000258909 COQ4Q9Y3A0 265 aa19.97■□□□□ 0.79
TM6SF1-201ENST00000258909 TM4SF5O14894 197 aa19.96■□□□□ 0.79
TM6SF1-201ENST00000258909 ADRB1P08588 477 aa19.96■□□□□ 0.79
TM6SF1-201ENST00000258909 HOXB2P14652 356 aa19.96■□□□□ 0.79
TM6SF1-201ENST00000258909 CD44P16070 742 aaKnown RBP19.96■□□□□ 0.79
TM6SF1-201ENST00000258909 TKTL1P51854 596 aa19.96■□□□□ 0.79
TM6SF1-201ENST00000258909 LRRC63Q05C16 580 aa19.96■□□□□ 0.79
TM6SF1-201ENST00000258909 MAP7D1Q3KQU3 841 aa19.96■□□□□ 0.79
TM6SF1-201ENST00000258909 RAB41Q5JT25 222 aa19.96■□□□□ 0.79
TM6SF1-201ENST00000258909 CYP2U1Q7Z449 544 aa19.96■□□□□ 0.79
TM6SF1-201ENST00000258909 PIGKQ92643 395 aa19.96■□□□□ 0.79
TM6SF1-201ENST00000258909 TIGD1Q96MW7 591 aa19.96■□□□□ 0.79
TM6SF1-201ENST00000258909 CNTNAP3BQ96NU0 1288 aa19.96■□□□□ 0.79
TM6SF1-201ENST00000258909 EDEM2Q9BV94 578 aa19.96■□□□□ 0.79
TM6SF1-201ENST00000258909 CNTNAP3Q9BZ76 1288 aa19.96■□□□□ 0.79
TM6SF1-201ENST00000258909 MAN1B1Q9UKM7 699 aa19.96■□□□□ 0.79
TM6SF1-201ENST00000258909 TSPAN16Q9UKR8 245 aa19.96■□□□□ 0.79
TM6SF1-201ENST00000258909 STARD13Q9Y3M8 1113 aa19.96■□□□□ 0.79
TM6SF1-201ENST00000258909 EPG5Q9HCE0 2579 aa19.96■□□□□ 0.79
TM6SF1-201ENST00000258909 CISD3P0C7P0 127 aa19.95■□□□□ 0.78
TM6SF1-201ENST00000258909 CD19P15391 556 aa19.95■□□□□ 0.78
TM6SF1-201ENST00000258909 GABRG2P18507 467 aa19.95■□□□□ 0.78
TM6SF1-201ENST00000258909 NTSR1P30989 418 aa19.95■□□□□ 0.78
TM6SF1-201ENST00000258909 DGKGP49619 791 aa19.95■□□□□ 0.78
TM6SF1-201ENST00000258909 YWHAGP61981 247 aaKnown RBP eCLIP19.95■□□□□ 0.78
TM6SF1-201ENST00000258909 PDE4CQ08493 712 aa19.95■□□□□ 0.78
TM6SF1-201ENST00000258909 RSRC2Q7L4I2 434 aaKnown RBP19.95■□□□□ 0.78
TM6SF1-201ENST00000258909 TRMT11Q7Z4G4 463 aaKnown RBP19.95■□□□□ 0.78
TM6SF1-201ENST00000258909 CHPFQ8IZ52 775 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms