RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 SEMA4AQ9H3S1 761 aa24.07■■□□□ 1.44
LSM4-201ENST00000252816 SPHK2Q9NRA0 654 aa24.07■■□□□ 1.44
LSM4-201ENST00000252816 MARCH2Q9P0N8 246 aa24.07■■□□□ 1.44
LSM4-201ENST00000252816 LSM7Q9UK45 103 aaKnown RBP24.07■■□□□ 1.44
LSM4-201ENST00000252816 K7EQS6 105 aa24.06■■□□□ 1.44
LSM4-201ENST00000252816 HOXC11O43248 304 aaPredicted RBP24.06■■□□□ 1.44
LSM4-201ENST00000252816 LILRB5O75023 590 aa24.06■■□□□ 1.44
LSM4-201ENST00000252816 LETM1O95202 739 aaPredicted RBP24.06■■□□□ 1.44
LSM4-201ENST00000252816 KLKB1P03952 638 aa24.06■■□□□ 1.44
LSM4-201ENST00000252816 GPD2P43304 727 aa24.06■■□□□ 1.44
LSM4-201ENST00000252816 DAOAP59103 153 aa24.06■■□□□ 1.44
LSM4-201ENST00000252816 GAD2Q05329 585 aa24.06■■□□□ 1.44
LSM4-201ENST00000252816 CCDC183Q5T5S1 534 aa24.06■■□□□ 1.44
LSM4-201ENST00000252816 BSPRYQ5W0U4 402 aa24.06■■□□□ 1.44
LSM4-201ENST00000252816 DENND1BQ6P3S1 775 aa24.06■■□□□ 1.44
LSM4-201ENST00000252816 SCML4Q8N228 414 aa24.06■■□□□ 1.44
LSM4-201ENST00000252816 ZNF606Q8WXB4 792 aa24.06■■□□□ 1.44
LSM4-201ENST00000252816 HSFY1Q96LI6 401 aa24.06■■□□□ 1.44
LSM4-201ENST00000252816 FRYLO94915 3013 aa24.05■■□□□ 1.44
LSM4-201ENST00000252816 GPR179Q6PRD1 2367 aa24.05■■□□□ 1.44
LSM4-201ENST00000252816 CHURC1-FNTBB4DL54 471 aa24.05■■□□□ 1.44
LSM4-201ENST00000252816 HMBSP08397 361 aa24.05■■□□□ 1.44
LSM4-201ENST00000252816 GNA15P30679 374 aa24.05■■□□□ 1.44
LSM4-201ENST00000252816 USP8P40818 1118 aa24.05■■□□□ 1.44
LSM4-201ENST00000252816 COG7P83436 770 aa24.05■■□□□ 1.44
LSM4-201ENST00000252816 KCNMA1Q12791 1236 aa24.05■■□□□ 1.44
LSM4-201ENST00000252816 BTBD8Q5XKL5 378 aa24.05■■□□□ 1.44
LSM4-201ENST00000252816 SASS6Q6UVJ0 657 aa24.05■■□□□ 1.44
LSM4-201ENST00000252816 ETFBKMTQ8IXQ9 262 aa24.05■■□□□ 1.44
LSM4-201ENST00000252816 NAT16Q8N8M0 369 aa24.05■■□□□ 1.44
LSM4-201ENST00000252816 RPLP0P6Q8NHW5 317 aa24.05■■□□□ 1.44
LSM4-201ENST00000252816 CLEC4CQ8WTT0 213 aa24.05■■□□□ 1.44
LSM4-201ENST00000252816 EDEM1Q92611 657 aa24.05■■□□□ 1.44
LSM4-201ENST00000252816 PNKPQ96T60 521 aa24.05■■□□□ 1.44
LSM4-201ENST00000252816 TAB2Q9NYJ8 693 aa24.05■■□□□ 1.44
LSM4-201ENST00000252816 DNAJC12Q9UKB3 198 aa24.05■■□□□ 1.44
LSM4-201ENST00000252816 THAP12O43422 761 aa24.04■■□□□ 1.44
LSM4-201ENST00000252816 ATG13O75143 517 aa24.04■■□□□ 1.44
LSM4-201ENST00000252816 LMNAP02545 664 aaKnown RBP24.04■■□□□ 1.44
LSM4-201ENST00000252816 EEF1GP26641 437 aaKnown RBP24.04■■□□□ 1.44
LSM4-201ENST00000252816 EIF2DP41214 584 aaKnown RBP24.04■■□□□ 1.44
LSM4-201ENST00000252816 RPL34P49207 117 aaKnown RBP24.04■■□□□ 1.44
LSM4-201ENST00000252816 NRLP54845 237 aa24.04■■□□□ 1.44
LSM4-201ENST00000252816 ANO4Q32M45 955 aa24.04■■□□□ 1.44
LSM4-201ENST00000252816 CDKAL1Q5VV42 579 aa24.04■■□□□ 1.44
LSM4-201ENST00000252816 PHTF2Q8N3S3 785 aa24.04■■□□□ 1.44
LSM4-201ENST00000252816 ANO10Q9NW15 660 aa24.04■■□□□ 1.44
LSM4-201ENST00000252816 TMEM63CQ9P1W3 806 aa24.04■■□□□ 1.44
LSM4-201ENST00000252816 STRIP2Q9ULQ0 834 aa24.04■■□□□ 1.44
LSM4-201ENST00000252816 PTPRZ1P23471 2315 aaPredicted RBP24.04■■□□□ 1.44
LSM4-201ENST00000252816 FAM186AA6NE01 2351 aa24.03■■□□□ 1.44
LSM4-201ENST00000252816 SLC12A8A0AV02 714 aa24.03■■□□□ 1.44
LSM4-201ENST00000252816 PES1O00541 588 aaKnown RBP24.03■■□□□ 1.44
LSM4-201ENST00000252816 PNMA6AP0CW24 399 aaPredicted RBP24.03■■□□□ 1.44
LSM4-201ENST00000252816 CHRM1P11229 460 aaPredicted RBP24.03■■□□□ 1.44
LSM4-201ENST00000252816 FNTBP49356 437 aa24.03■■□□□ 1.44
LSM4-201ENST00000252816 SEC13P55735 322 aa24.03■■□□□ 1.44
LSM4-201ENST00000252816 KDSRQ06136 332 aa24.03■■□□□ 1.44
LSM4-201ENST00000252816 HEATR6Q6AI08 1181 aaKnown RBP24.03■■□□□ 1.44
LSM4-201ENST00000252816 TPGS1Q6ZTW0 290 aa24.03■■□□□ 1.44
LSM4-201ENST00000252816 SUMF1Q8NBK3 374 aa24.03■■□□□ 1.44
LSM4-201ENST00000252816 USP33Q8TEY7 942 aa24.03■■□□□ 1.44
LSM4-201ENST00000252816 P2RY11Q96G91 374 aa24.03■■□□□ 1.44
LSM4-201ENST00000252816 ARHGEF4Q9NR80 690 aa24.03■■□□□ 1.44
LSM4-201ENST00000252816 CYTH4Q9UIA0 394 aa24.03■■□□□ 1.44
LSM4-201ENST00000252816 FOXN3O00409 490 aaPredicted RBP24.02■■□□□ 1.44
LSM4-201ENST00000252816 MED7O43513 233 aa24.02■■□□□ 1.44
LSM4-201ENST00000252816 TULP3O75386 442 aa24.02■■□□□ 1.44
LSM4-201ENST00000252816 KAT7O95251 611 aa24.02■■□□□ 1.44
LSM4-201ENST00000252816 CORO1AP31146 461 aaKnown RBP24.02■■□□□ 1.44
LSM4-201ENST00000252816 HOXA6P31267 233 aa24.02■■□□□ 1.44
LSM4-201ENST00000252816 STX1AQ16623 288 aa24.02■■□□□ 1.44
LSM4-201ENST00000252816 MEA1Q16626 185 aa24.02■■□□□ 1.44
LSM4-201ENST00000252816 FMNL3Q8IVF7 1028 aa24.02■■□□□ 1.44
LSM4-201ENST00000252816 IRGQQ8WZA9 623 aa24.02■■□□□ 1.44
LSM4-201ENST00000252816 MIS12Q9H081 205 aa24.02■■□□□ 1.44
LSM4-201ENST00000252816 ST7Q9NRC1 585 aa24.02■■□□□ 1.44
LSM4-201ENST00000252816 ABCC13Q9NSE7 274 aa24.02■■□□□ 1.44
LSM4-201ENST00000252816 OLA1Q9NTK5 396 aaKnown RBP24.02■■□□□ 1.44
LSM4-201ENST00000252816 FANCLQ9NW38 375 aa24.02■■□□□ 1.44
LSM4-201ENST00000252816 MARK1Q9P0L2 795 aa24.02■■□□□ 1.44
LSM4-201ENST00000252816 SFMBT1Q9UHJ3 866 aa24.02■■□□□ 1.44
LSM4-201ENST00000252816 CFAP54Q96N23 3096 aa24.02■■□□□ 1.44
LSM4-201ENST00000252816 EP300Q09472 2414 aaPredicted RBP24.02■■□□□ 1.44
LSM4-201ENST00000252816 A0A0A0MRY4 1105 aa24.01■■□□□ 1.43
LSM4-201ENST00000252816 TRIM24O15164 1050 aa24.01■■□□□ 1.43
LSM4-201ENST00000252816 FBXO21O94952 628 aa24.01■■□□□ 1.43
LSM4-201ENST00000252816 APODP05090 189 aa24.01■■□□□ 1.43
LSM4-201ENST00000252816 GRIA2P42262 883 aa24.01■■□□□ 1.43
LSM4-201ENST00000252816 KRT31Q15323 416 aa24.01■■□□□ 1.43
LSM4-201ENST00000252816 C2orf27AQ580R0 203 aa24.01■■□□□ 1.43
LSM4-201ENST00000252816 KLHDC7AQ5VTJ3 777 aa24.01■■□□□ 1.43
LSM4-201ENST00000252816 RNF139Q8WU17 664 aa24.01■■□□□ 1.43
LSM4-201ENST00000252816 BBS2Q9BXC9 721 aa24.01■■□□□ 1.43
LSM4-201ENST00000252816 SLC4A5Q9BY07 1137 aa24.01■■□□□ 1.43
LSM4-201ENST00000252816 DCLK3Q9C098 648 aa24.01■■□□□ 1.43
LSM4-201ENST00000252816 AGO1Q9UL18 857 aaKnown RBP24.01■■□□□ 1.43
LSM4-201ENST00000252816 FHOD1Q9Y613 1164 aa24.01■■□□□ 1.43
LSM4-201ENST00000252816 KIAA1549LQ6ZVL6 1849 aa24■■□□□ 1.43
LSM4-201ENST00000252816 OTOGLQ3ZCN5 2332 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms