RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 PPM1NQ8N819 430 aa22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 C16orf70Q9BSU1 422 aa22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 RPL26L1Q9UNX3 145 aaKnown RBP22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 DERAQ9Y315 318 aa22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 A0A0G2JND7 137 aa22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 KLF11O14901 512 aa22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 DNAJC6O75061 913 aa22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 SKAP2O75563 359 aaPredicted RBP22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 GABBR2O75899 941 aa22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 KRT37O76014 449 aa22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 SNRPAP09012 282 aaKnown RBP22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 BGNP21810 368 aa22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 SERPINB4P48594 390 aa22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 ARFIP2P53365 341 aa22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 ZDHHC17Q8IUH5 632 aa22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 SCUBE3Q8IX30 993 aa22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 CTAGE3PQ8IX95 158 aa22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 STK32AQ8WU08 396 aa22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 EMID1Q96A84 441 aaPredicted RBP22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 NRDE2Q9H7Z3 1164 aa22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 KCNK13Q9HB14 408 aa22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 MTO1Q9Y2Z2 717 aaKnown RBP22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 NME7Q9Y5B8 376 aa22.45■■□□□ 1.18
SH2D3A-201ENST00000245908 CXorf49A8MYA2 514 aaPredicted RBP22.44■■□□□ 1.18
SH2D3A-201ENST00000245908 COPEO14579 308 aa22.44■■□□□ 1.18
SH2D3A-201ENST00000245908 PEX11AO75192 247 aa22.44■■□□□ 1.18
SH2D3A-201ENST00000245908 APRTP07741 180 aa22.44■■□□□ 1.18
SH2D3A-201ENST00000245908 MAGEA3P43357 314 aa22.44■■□□□ 1.18
SH2D3A-201ENST00000245908 SNX16P57768 344 aa22.44■■□□□ 1.18
SH2D3A-201ENST00000245908 DCAF4L1Q3SXM0 396 aa22.44■■□□□ 1.18
SH2D3A-201ENST00000245908 CCDC110Q8TBZ0 833 aa22.44■■□□□ 1.18
SH2D3A-201ENST00000245908 APBB2Q92870 758 aa22.44■■□□□ 1.18
SH2D3A-201ENST00000245908 SRPK1Q96SB4 655 aaKnown RBP22.44■■□□□ 1.18
SH2D3A-201ENST00000245908 TUBB6Q9BUF5 446 aa22.44■■□□□ 1.18
SH2D3A-201ENST00000245908 RNPEPL1Q9HAU8 725 aa22.44■■□□□ 1.18
SH2D3A-201ENST00000245908 VTA1Q9NP79 307 aa22.44■■□□□ 1.18
SH2D3A-201ENST00000245908 FAM49BQ9NUQ9 324 aa22.44■■□□□ 1.18
SH2D3A-201ENST00000245908 HEY2Q9UBP5 337 aa22.44■■□□□ 1.18
SH2D3A-201ENST00000245908 HESX1Q9UBX0 185 aa22.44■■□□□ 1.18
SH2D3A-201ENST00000245908 SNX9Q9Y5X1 595 aa22.44■■□□□ 1.18
SH2D3A-201ENST00000245908 SBF1O95248 1867 aa22.44■■□□□ 1.18
SH2D3A-201ENST00000245908 RBM47A0AV96 593 aaKnown RBP22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 SLC15A5A6NIM6 579 aa22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 SMNDC1O75940 238 aaKnown RBP eCLIP22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 HAUS5O94927 633 aa22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 MAP3K6O95382 1288 aa22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 CYP2F1P24903 491 aa22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 PTPN9P43378 593 aa22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 CDK16Q00536 496 aa22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 WASHC2DQ5SRD0 308 aa22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 SKA1Q96BD8 255 aa22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 SH3GL3Q99963 347 aa22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 PLEKHA5Q9HAU0 1116 aa22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 MKS1Q9NXB0 559 aa22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 PPEF2O14830 753 aa22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 APOEP02649 317 aa22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 DLDP09622 509 aaKnown RBP22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 CCNFP41002 786 aa22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 DPYSL2Q16555 572 aa22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 CAPRIN2Q6IMN6 1127 aaKnown RBP22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 CDHR3Q6ZTQ4 885 aa22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 ZNF410Q86VK4 478 aa22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 OPTNQ96CV9 577 aa22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 ZNF570Q96NI8 536 aa22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 C11orf84Q9BUA3 381 aaPredicted RBP22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 TMEM120AQ9BXJ8 343 aa22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 IQCGQ9H095 443 aaKnown RBP22.43■■□□□ 1.18
SH2D3A-201ENST00000245908 KLHL33A6NCF5 533 aa22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 NEFHP12036 1026 aa22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 ZNF792Q3KQV3 632 aa22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 PPP6R3Q5H9R7 873 aaPredicted RBP22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 LGSNQ5TDP6 509 aa22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 ARHGAP17Q68EM7 881 aa22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 SH3TC2Q8TF17 1288 aa22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 PTCD3Q96EY7 689 aaKnown RBP22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 CXCL16Q9H2A7 254 aa22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 SMYD2Q9NRG4 433 aa22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 NKX1-2Q9UD57 310 aaPredicted RBP22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 CORO1CQ9ULV4 474 aaPredicted RBP22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 GCATO75600 419 aa22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 TPSB2P20231 275 aa22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 L1CAMP32004 1257 aa22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 TPSAB1Q15661 275 aa22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 UNC5AQ6ZN44 842 aa22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 ZNF534Q76KX8 674 aa22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 UNC93AQ86WB7 457 aa22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 CENPIQ92674 756 aaPredicted RBP22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 B3GNT5Q9BYG0 378 aa22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 PLLPQ9Y342 182 aa22.42■■□□□ 1.18
SH2D3A-201ENST00000245908 TOMM70O94826 608 aa22.41■■□□□ 1.18
SH2D3A-201ENST00000245908 NPTXRO95502 500 aa22.41■■□□□ 1.18
SH2D3A-201ENST00000245908 ZFXP17010 805 aaPredicted RBP22.41■■□□□ 1.18
SH2D3A-201ENST00000245908 GM2AP17900 193 aa22.41■■□□□ 1.18
SH2D3A-201ENST00000245908 TFE3P19532 575 aaPredicted RBP22.41■■□□□ 1.18
SH2D3A-201ENST00000245908 CALB2P22676 271 aa22.41■■□□□ 1.18
SH2D3A-201ENST00000245908 MARCH8Q5T0T0 291 aa22.41■■□□□ 1.18
SH2D3A-201ENST00000245908 VPS52Q8N1B4 723 aa22.41■■□□□ 1.18
SH2D3A-201ENST00000245908 LRRC52Q8N7C0 313 aa22.41■■□□□ 1.18
SH2D3A-201ENST00000245908 CDCA5Q96FF9 252 aa22.41■■□□□ 1.18
SH2D3A-201ENST00000245908 SNX27Q96L92 541 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms