RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 C4orf22Q6V702 233 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 ALYREFQ86V81 257 aaKnown RBP19.41■□□□□ 0.7
CPSF3-201ENST00000238112 ARHGAP24Q8N264 748 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 MCUQ8NE86 351 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 USP6NLQ92738 828 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 FGD4Q96M96 766 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 ZNF670Q9BS34 389 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 OSBPL1AQ9BXW6 950 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 MMADHCQ9H3L0 296 aaPredicted RBP19.41■□□□□ 0.7
CPSF3-201ENST00000238112 RNPEPQ9H4A4 650 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 TAS2R1Q9NYW7 299 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 ARMCX1Q9P291 453 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 CORO1CQ9ULV4 474 aaPredicted RBP19.41■□□□□ 0.7
CPSF3-201ENST00000238112 AKT3Q9Y243 479 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 LRRC37A2A6NM11 1700 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 LTBP3Q9NS15 1303 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 SKAP2O75563 359 aaPredicted RBP19.41■□□□□ 0.7
CPSF3-201ENST00000238112 RFPL1O75677 317 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 NEBLO76041 1014 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 MRPS5P82675 430 aaKnown RBP19.41■□□□□ 0.7
CPSF3-201ENST00000238112 POU5F1BQ06416 359 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 BST1Q10588 318 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 RCN1Q15293 331 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 CHI3L2Q15782 390 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 CA9Q16790 459 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 PMF1Q6P1K2 205 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 UNC5AQ6ZN44 842 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 LRRN4Q8WUT4 740 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 STMN2Q93045 179 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 FAM124BQ9H5Z6 455 aaPredicted RBP19.41■□□□□ 0.7
CPSF3-201ENST00000238112 SMYD2Q9NRG4 433 aa19.41■□□□□ 0.7
CPSF3-201ENST00000238112 CCDC195A0A1B0GUA6 201 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 MDM4O15151 490 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 ZBTB7AO95365 584 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 ACADSP16219 412 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 ARF4P18085 180 aaPredicted RBP19.4■□□□□ 0.7
CPSF3-201ENST00000238112 SLC6A3Q01959 620 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 KCTD2Q14681 263 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 FAM91A1Q658Y4 838 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 NUDCD3Q8IVD9 361 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 GSDMBQ8TAX9 411 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 ACAP3Q96P50 834 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 PLAC1Q9HBJ0 212 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 PCMTD2Q9NV79 361 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 MKS1Q9NXB0 559 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 GPRC5DQ9NZD1 345 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 C2CD2Q9Y426 696 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 UGT1A9O60656 530 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 CSH1P0DML2 217 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 CSH2P0DML3 217 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 RARBP10826 455 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 INSRRP14616 1297 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 VHLP40337 213 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 ACSBG2Q5FVE4 666 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 PPP1R26Q5T8A7 1209 aaPredicted RBP19.4■□□□□ 0.7
CPSF3-201ENST00000238112 ARID3BQ8IVW6 561 aaPredicted RBP19.4■□□□□ 0.7
CPSF3-201ENST00000238112 WWP1Q9H0M0 922 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 UGT1A7Q9HAW7 530 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 UGT1A10Q9HAW8 530 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 UGT1A8Q9HAW9 530 aa19.4■□□□□ 0.7
CPSF3-201ENST00000238112 NVLO15381 856 aaKnown RBP19.39■□□□□ 0.69
CPSF3-201ENST00000238112 CNMDO75829 334 aa19.39■□□□□ 0.69
CPSF3-201ENST00000238112 STAU1O95793 577 aaKnown RBP19.39■□□□□ 0.69
CPSF3-201ENST00000238112 CYP2F1P24903 491 aa19.39■□□□□ 0.69
CPSF3-201ENST00000238112 ZNF484Q5JVG2 852 aa19.39■□□□□ 0.69
CPSF3-201ENST00000238112 DEFB132Q7Z7B7 95 aa19.39■□□□□ 0.69
CPSF3-201ENST00000238112 SESTD1Q86VW0 696 aa19.39■□□□□ 0.69
CPSF3-201ENST00000238112 SCUBE3Q8IX30 993 aa19.39■□□□□ 0.69
CPSF3-201ENST00000238112 NDUFAF2Q8N183 169 aa19.39■□□□□ 0.69
CPSF3-201ENST00000238112 SMC1BQ8NDV3 1235 aa19.39■□□□□ 0.69
CPSF3-201ENST00000238112 KIF12Q96FN5 646 aa19.39■□□□□ 0.69
CPSF3-201ENST00000238112 MMP19Q99542 508 aa19.39■□□□□ 0.69
CPSF3-201ENST00000238112 EBNA1BP2Q99848 306 aaKnown RBP19.39■□□□□ 0.69
CPSF3-201ENST00000238112 NRDE2Q9H7Z3 1164 aa19.39■□□□□ 0.69
CPSF3-201ENST00000238112 SIRPGQ9P1W8 387 aa19.39■□□□□ 0.69
CPSF3-201ENST00000238112 KRT36O76013 467 aa19.39■□□□□ 0.69
CPSF3-201ENST00000238112 PGM1P36871 562 aa19.39■□□□□ 0.69
CPSF3-201ENST00000238112 SNX16P57768 344 aa19.39■□□□□ 0.69
CPSF3-201ENST00000238112 TTLL4Q14679 1199 aa19.39■□□□□ 0.69
CPSF3-201ENST00000238112 MROH9Q5TGP6 573 aa19.39■□□□□ 0.69
CPSF3-201ENST00000238112 CRLF3Q8IUI8 442 aa19.39■□□□□ 0.69
CPSF3-201ENST00000238112 PDCD7Q8N8D1 485 aaKnown RBP19.39■□□□□ 0.69
CPSF3-201ENST00000238112 DEPDC1BQ8WUY9 529 aa19.39■□□□□ 0.69
CPSF3-201ENST00000238112 ZFATQ9P243 1243 aa19.39■□□□□ 0.69
CPSF3-201ENST00000238112 PPARGC1AQ9UBK2 798 aaKnown RBP19.39■□□□□ 0.69
CPSF3-201ENST00000238112 HESX1Q9UBX0 185 aa19.39■□□□□ 0.69
CPSF3-201ENST00000238112 A6NJR5 290 aa19.38■□□□□ 0.69
CPSF3-201ENST00000238112 EIF4E1BA6NMX2 242 aaKnown RBP19.38■□□□□ 0.69
CPSF3-201ENST00000238112 METTL18O95568 372 aa19.38■□□□□ 0.69
CPSF3-201ENST00000238112 BAG6P46379 1132 aa19.38■□□□□ 0.69
CPSF3-201ENST00000238112 SERPINB9P50453 376 aa19.38■□□□□ 0.69
CPSF3-201ENST00000238112 TRMT10BQ6PF06 316 aaKnown RBP19.38■□□□□ 0.69
CPSF3-201ENST00000238112 RAB3IL1Q8TBN0 382 aa19.38■□□□□ 0.69
CPSF3-201ENST00000238112 FAM49BQ9NUQ9 324 aa19.38■□□□□ 0.69
CPSF3-201ENST00000238112 NMRK1Q9NWW6 199 aa19.38■□□□□ 0.69
CPSF3-201ENST00000238112 FAM159BA6NKW6 160 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 CYB561D2O14569 222 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 GCATO75600 419 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 PSMG1O95456 288 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 VTNP04004 478 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms