RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Trappc3O55013 180 aa23.61■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Serac1Q3U213 654 aa23.61■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Trim38Q5SZ99 471 aa23.61■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Cd6Q61003 665 aa23.61■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Tatdn1Q6P8M1 295 aa23.61■■□□□ 1.37
Scn1b-201ENSMUST00000098548 WtipQ7TQJ8 398 aa23.61■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Bicd1Q8BR07 835 aa23.61■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Arhgef33Q8BW86 850 aa23.61■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Epn3Q91W69 636 aa23.61■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Sh3d19Q91X43 789 aa23.61■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Prl2a1Q9JHK0 228 aa23.61■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Ccndbp1Q3TVC7 356 aa23.61■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Znf583Q3V080 568 aa23.61■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Ccdc92bQ5SUE3 299 aa23.61■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Fam43aQ8BUP8 424 aa23.61■■□□□ 1.37
Scn1b-201ENSMUST00000098548 D8Ertd738eQ8R1F0 94 aa23.61■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Pcdha11Q91Y19 950 aa23.61■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Mgrn1Q9D074 532 aa23.61■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Nmnat1Q9EPA7 285 aa23.61■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Erap1Q9EQH2 930 aa23.61■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Cbx8Q9QXV1 362 aa23.61■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Plxna3P70208 1872 aa23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Ms4a14A0A087WSD2 1232 aa23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 FancfE9Q5Z5 343 aa23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Zfp850J3QPC5 689 aa23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Gm3642K7N6V4 267 aa23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Pdk4O70571 412 aa23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 P01631 113 aa23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 P01652 108 aa23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Spout1Q3UHX9 385 aaKnown RBP23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Rcsd1Q3UZA1 412 aa23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Acvrl1Q61288 502 aa23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Dmc1Q61880 340 aa23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 RbfaQ6P3B9 350 aa23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Casd1Q7TN73 797 aa23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Enpp4Q8BTJ4 456 aa23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Cfap36Q8C6E0 343 aa23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Tbc1d19Q8VDV7 526 aa23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Col26a1Q91VF6 440 aa23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Nek8Q91ZR4 698 aa23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Prc1Q99K43 603 aaKnown RBP23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Rec114Q9CWH4 259 aa23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Ddx24Q9ESV0 857 aaKnown RBP23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Gfra4Q9JJT2 260 aa23.6■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Gm5485A0A1D5RM98 91 aa23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Drg1P32233 367 aaKnown RBP23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Hoxd13P70217 339 aa23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 CkbQ04447 381 aa23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Olfr8Q60892 310 aa23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Ltbp3Q61810 1268 aa23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Sh3gl2Q62420 352 aa23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 EfsQ64355 560 aa23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 MyorgQ69ZQ1 716 aa23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Ccdc25Q78PG9 208 aa23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Pcsk9Q80W65 694 aa23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 BoraQ8BS90 525 aa23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Cyp2d26Q8CIM7 500 aa23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Kremen2Q8K1S7 461 aa23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Uhrf1Q8VDF2 782 aaKnown RBP23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Rsph1Q8VIG3 301 aa23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 DeraQ91YP3 318 aa23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Eps8l2Q99K30 729 aa23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Cdk5rap3Q99LM2 503 aa23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Snx24Q9CRB0 169 aa23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 ArpinQ9D0A3 226 aa23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Rp1P56716 2095 aa23.59■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Mup5P11591 180 aa23.58■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Krt19P19001 403 aa23.58■■□□□ 1.37
Scn1b-201ENSMUST00000098548 HelqQ2VPA6 1069 aa23.58■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Rnf40Q3U319 1001 aa23.58■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Elf3Q3UPW2 391 aa23.58■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Ptpn14Q62130 1189 aa23.58■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Fcrl5Q68SN8 596 aa23.58■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Kctd12bQ8C7J6 292 aa23.58■■□□□ 1.37
Scn1b-201ENSMUST00000098548 McmbpQ8R3C0 642 aa23.58■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Chordc1Q9D1P4 331 aaKnown RBP23.58■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Nxnl2Q9D531 156 aa23.58■■□□□ 1.37
Scn1b-201ENSMUST00000098548 Q9D9D9 101 aa23.58■■□□□ 1.37
Scn1b-201ENSMUST00000098548 HpdP49429 393 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Nudt1P53368 156 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Gsdmc2Q2KHK6 480 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Gsdmc4Q3TR54 480 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Tars2Q3UQ84 723 aaKnown RBP23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 DstykQ6XUX1 927 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 HpseQ6YGZ1 535 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Rps6ka6Q7TPS0 764 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Q80Y73 168 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 AA792892Q8C6S1 278 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Gsdmc3Q8CB12 480 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Zmiz2Q8CIE2 920 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Defb36Q8K3U4 67 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Fkbp6Q91XW8 327 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 AticQ9CWJ9 592 aaKnown RBP23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Pak1ip1Q9DCE5 382 aaKnown RBP23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 NckipsdQ9ESJ4 714 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Pcdh7A0A0A6YY83 1255 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Zfp990B1AVN5 605 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Cyp2t4E9PWV0 503 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 TpteG5E8H5 664 aa23.57■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Ctnnal1O88327 731 aa23.57■■□□□ 1.36
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms